Hibiscus syriacus (Rose-of-Sharon): 120183416
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Entry
120183416 CDS
T09559
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120183416
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120183416
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SSDB
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120183416
NCBI-ProteinID:
XP_039044049
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MAFLASLVLVSFLLAFSLEGYTSKPLAYDVPGIVSKKAMNVIDSCWRTKSNWATNRKALA
DCVVGFGKAAVGGKYGAIYVVTSPYDDPVDPKPGTLRYSVIQTAPLWIIFARDMVIKLKN
ELIVNSFKTIDGRGAKVEIAYGPCITIQGVTNVIIHGISIHDCKPGLSGMVRSSPTHVGM
RGGSDGDAISVFASSNIWIDHCYLAHSRDGLIDVIHASTAVTISNNYFSQHDKVMLLGHR
DTFTADKVMKVTIVFNRFGEGLIERMPRVRIGYAHVANNRYDEWKMYAIGGSANPTIFSE
GNYFVAPDNPSNKQVTKREASNWKNWRWQSSKDVFMNGAYFVSSGYGSCAPHYTRAQSFT
TAPGYMVPVLTSNAGPLRCVVGKPC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctttccttgcctctctcgttttggtttcatttcttttagctttttcactcgaaggt
tacacctcaaaaccacttgcatacgatgtccccggcatcgtctcgaagaaggctatgaat
gtaatcgattcttgttggcgaaccaagtcgaattgggctaccaatcgcaaagccttggct
gattgtgtggttggcttcggaaaagcagcggttggagggaaatacggagcgatatatgta
gttacaagcccttatgatgatcccgttgaccctaaacccggcacgcttcgttacagtgtt
attcaaaccgctcctctttggatcattttcgctagagatatggttataaagctaaaaaat
gagctgatagtgaatagttttaagaccattgatggcagaggagctaaagtggagattgca
tatggaccttgcataacgattcaaggtgttaccaatgttataatacacgggattagcatt
catgactgcaagccggggttgtccggtatggttaggagctccccgacgcatgtaggaatg
cgtggaggctccgacggagatgctatcagtgttttcgcgtcttcgaatatctggatcgat
cattgctatctcgcgcattctagggatggtcttatcgatgtgattcatgcttcaactgct
gtcacgatctccaataactatttctctcaacatgataaagtgatgctgttaggacacaga
gacacgttcactgccgacaaagtcatgaaagttacgatagtttttaacagattcggcgag
ggacttatcgagaggatgccgagggtcaggataggctatgcacatgttgctaacaacaga
tacgatgaatggaagatgtatgccattggcggcagtgcaaatccgaccattttcagcgag
gggaactacttcgtggcgcccgataaccctagcaacaaacaggttaccaagagagaagca
agcaattggaaaaattggagatggcagtcgtcaaaggatgtctttatgaatggtgcgtat
ttcgtttcgtccggctacggaagttgtgctcctcattatactagggctcaatccttcact
accgcccccggatacatggtccctgttttaacatcaaatgctggccctttacgttgtgtc
gttggaaaaccatgctaa
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