Hibiscus syriacus (Rose-of-Sharon): 120184052
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Entry
120184052 CDS
T09559
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120184052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120184052
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120184052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
RPT
Motif
Other DBs
NCBI-GeneID:
120184052
NCBI-ProteinID:
XP_039044552
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MDDSLCEFFEESELVGDDDLFSIFESLDGLTESFQVPFTPFEETAAAGGAQMESETEGTS
PKSKRRKVASLEETTANADGPQRVSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQAS
IIGGVVDYISELQQVLHSLQAKKQRKVYGKVLSPRMLLSPRPSQLSPRPLNLPISPRTPQ
PGSPYKPRTLQKAGYLSPTVAATISLEPSPTSSTSSVDNNELVANSKSPIADVEVKFSGP
NLVLKTVSTRIPGQALKIISALEELSLEILNVNINTVDETVLNSFTIKIGIECRLSAEEL
AHQIQQTFGHC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtttgtgtgagtttttcgaagaatcagaactcgtcggcgatgatgatttg
tttagtatttttgagagcttagatggactcactgagtcgtttcaagtacctttcaccccg
tttgaagaaacggctgccgctggtggtgcacaaatggagtccgaaacggagggaacttcg
ccgaaaagcaagaggcggaaggtggcttctttggaggaaacgacggcgaacgccgatgga
cctcaaagggtgtcgcatatcaccgtcgaacgcaaccggaggaagcaaatgaacgagcat
ttatcggtgctgagatcgttgatgccttgcttctatgtcaaaagaggggatcaagcatca
attattgggggagtagtggattacatcagtgagttgcagcaagttctacactcgctccag
gcgaagaaacaaaggaaagtttacggtaaagtgttgagtccgaggatgctgttgagtccg
agaccgtctcaactcagtccgaggccgctgaacttgccgataagcccgagaacacctcag
cccggtagcccttacaagccgaggacgttgcaaaaggctggttatctgtctccgaccgtg
gcggctactatttcgctcgaaccgtcaccgacttcctccacttcctccgtcgacaacaat
gagctcgtggcgaactcgaaatctccgattgccgacgtggaagtgaagttttccggcccg
aatctcgttttgaagacggtgtccactcggattccaggtcaagctctgaagataatctct
gctcttgaggaactctcgctcgaaatactcaatgtcaacattaacaccgtcgatgaaacc
gtgcttaattccttcacgatcaagattggaattgaatgccgcttaagtgcagaagaactc
gcccaccagatccagcaaactttcggtcattgctag
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