Hibiscus syriacus (Rose-of-Sharon): 120187438
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Entry
120187438 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120187438
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120187438
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120187438
NCBI-ProteinID:
XP_039047082
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All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MPIPLSLFLLIWPLLQAPIFIFSSPVQDSDQAAQLVDESIMNATMARRGLGFLSCGTGNP
IDDCWRCDPHWEKNRRRLADCAIGFGKNAIGGRDGKIYVVMDPSDRDPINPKPGTIRHAA
IQTEPLWIVFAHDMVIKLKQELLMSSYKTIDGRGANVHIAGGPCITVQSVSNIIIHGINI
RGCKRGGNAYVRDSPNHYGWRIISDGDAVLISRSSHIWVDHCSLSNSTNGLVNAIQGSTA
ITISSNYMTHHNKVVLLGHGDSYEQDNNMQVTIAFNHFGEGLVQGMPRCRHGYFHVVNND
YTHWEMYAIGGSANPTINSEGNRFLAPDNSNNKEVTKRIDASENGWRSWNWRSEGDLMLN
GAFFRASGKGTSSSYAKASSLSARPSSIVSELTGDAGVLVCKKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccaattccactatccctctttctccttatatggcctctccttcaggctcccatcttc
attttctcgtcccctgttcaagactccgaccaagccgcccaactagtcgatgagagcatc
atgaatgctacaatggctaggaggggcttgggatttctctcctgcggaaccggaaacccc
atcgatgactgctggcgatgtgaccctcattgggagaagaaccgtcggaggctagctgat
tgcgccattgggttcggtaagaatgccatcggtggcagggatgggaaaatatacgtagtc
atggaccctagtgaccgtgaccccatcaaccccaaacccgggactattaggcatgctgct
atccaaaccgaacccttatggatcgtttttgcgcatgacatggttattaaattgaagcaa
gaattgctaatgagctcatacaagaccatcgatggtcgaggcgccaacgttcacatcgcc
ggtggtccgtgcattactgtacaatccgtgagcaacatcataatccacggtattaacata
cgcggttgcaagagaggagggaatgcttatgtgagagactctcctaaccattatggttgg
aggataatatcagacggtgatgctgtgctgatatccagaagcagccacatttgggtcgac
cattgctcgttgtcgaatagtacaaacgggctggtcaatgccatccaaggatccacggcc
atcaccatttccagcaattacatgactcatcataacaaggtagtgctcttgggccacggc
gactcttacgagcaggacaataacatgcaagtcaccattgccttcaatcactttggagaa
ggacttgtccaaggaatgcctagatgcaggcatggatattttcatgttgtgaacaatgat
tacacgcactgggaaatgtacgcgattggtgggagtgctaatccgacaatcaacagtgag
gggaataggtttcttgcaccggataattcaaacaacaaagaggtgactaaacgcatagat
gcgtcggagaatggatggaggtcatggaattggaggtcagagggggatttgatgttgaat
ggagcattcttcagggcatcaggcaaagggacctcttcgagttacgccaaggcatcgagc
ctgagtgcgaggccatcgtcaatagtgagcgagctcactggagatgccggtgtactcgtc
tgcaagaaggggtcgcgttgctag
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