Hibiscus syriacus (Rose-of-Sharon): 120189097
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Entry
120189097 CDS
T09559
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120189097
09123 Folding, sorting and degradation
03018 RNA degradation
120189097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120189097
03041 Spliceosome [BR:
hsyr03041
]
120189097
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120189097
mRNA degradation factors
5'-3' decay
Lsm complex
120189097
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120189097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120189097
NCBI-ProteinID:
XP_039048366
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MGRPIMNIHLREVICTSKDRDRFWRMPECYIRGNTIKYLRLRVPDEDIDKVQEETKSRAD
RKPPGVGRGRGRGGREDGPGGRQPKGVGRGLDDGPKGAAGGRGRDGPGGKTTGSRGGVRS
RSMLIVLG
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atggggagacctataatgaacatccatcttcgtgaagttatttgtacttcgaaggataga
gacaggttttggcgaatgcctgaatgttatatccgtggaaatacgatcaagtatcttcga
cttcgagttcctgatgaggatattgataaagttcaggaagaaacaaagagccgtgcagat
aggaagcctcctggtgtaggccgtggaagaggtagaggtggaagagaagatggtcctggt
ggaaggcaacctaaaggagttgggcgtgggttagatgatggtcctaagggtgcagctgga
ggcagaggcagggatggtccaggtggaaagactactggaagcagaggtggtgtcaggtcg
aggtcgatgctgattgttttagggtga
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