Hibiscus syriacus (Rose-of-Sharon): 120190163
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Entry
120190163 CDS
T09559
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120190163
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120190163
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120190163
NCBI-ProteinID:
XP_039049221
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MASLPFTTLPLLSLLLKLAYSSPHDTLIPYNTSGIASMKLMNIIDSCWRTINWATNREAL
ADCSVGFGKASIGGKYGPIYLVTNPYDDPVDPTPGTLRFGVIQSSPLWIIFATDMVITLK
NELIVNSFKTIDGRGANVEIAYGPCITIHGVTNVIIHGISIHDCKPGTAGLVRNSPTYVG
KRGGSDGDAISIYSSSNVWIDHCYLARSTDGLIDVIHASTDVTISNNYFAEHDKVMLLGH
SDDFIADEVMKITVVFNRFGEGLIERMPRVRIGYAHVANNRYDEWKMYAIGGSANPTILS
EGNYFIASDDPGSKEVTKRETSNWESWRWQSSRDVFINGAYFVPSGHGSSDPLYTMAQAF
IVAPGYMVPDLTADAGPLHCLIDRPCML
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccttccctttaccactctccctttgctttcacttctcttaaaattagcttat
tcatcaccccatgacaccttgataccatacaacacctccggcatcgcctccatgaagctc
atgaacatcatagactcgtgttggcgaaccatcaactgggctaccaaccgagaggcattg
gccgattgttctgtcggcttcgggaaagcatcgataggaggcaaatatggaccgatttat
ttagttacgaacccttatgatgatccggtcgaccctactcccggcacacttcgtttcggt
gtaattcagtcgagtccactttggatcatttttgctaccgacatggttatcactctaaaa
aacgaactgatagtcaatagtttcaagaccatcgatggcagaggagctaacgtcgagatt
gcgtacggaccctgcataacgatccacggggttaccaatgttatcatacatgggattagc
atacatgattgcaagccggggacggccggtttagttcggaactccccgacgtatgtagga
aagcgcggaggcagcgatggggatgcaatcagcatttattcctcttccaacgtttggatt
gatcactgctatcttgcccgttcgacggatggacttatcgatgtcattcatgcttcgact
gatgtcacaatctctaataactatttcgctgaacatgataaagtgatgttgttaggccac
agcgacgactttatcgccgatgaagttatgaaaattacggtagttttcaaccggttcgga
gagggacttatcgaacggatgccgagggtccgcataggctatgctcatgttgccaacaac
cgatacgacgaatggaagatgtatgccatcggcggcagcgctaatccaaccattttgagt
gaaggaaactacttcatagcctccgatgatcccggctcgaaagaggttaccaagagagaa
acaagtaattgggaaagttggagatggcagagttcgagagatgtgtttataaacggtgct
tatttcgttccgtcgggccatggaagttccgatcctctttacaccatggctcaagcattc
attgttgctccaggatacatggtccctgatttaacagctgacgctggtcctttacattgt
ctaatcgacagaccatgcatgctataa
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