Hibiscus syriacus (Rose-of-Sharon): 120192243
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Entry
120192243 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB4, mitochondrial-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120192243
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP100
120192243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Mg_chelatase
ABC_tran
AAA_7
Zeta_toxin
TniB
AAA_24
AAA_18
Torsin
NBD_SMAX1
NACHT
KIF9
Motif
Other DBs
NCBI-GeneID:
120192243
NCBI-ProteinID:
XP_039050978
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MASRRLSRCAISAVKASKASTPYLVRARAISASAYTLRNSLTLSHWPTNINEVAGRNGGS
FSLTRSFHSSLLRNSSATTPAQINQSEYTDMAWEGLVGAVQVARDSRQQMVESEHLLKAL
LEQKDGLARRIFTKAGLDNTSVLQATDDFISKQPKVMDTSNPVMGSHLSSLLDNSRKHKK
EMGDDFLSVEHFVLAFMSDKRFGQQLFKNLQLSEQALKDAVKAVRGNQRVTDQNPEGKYE
ALDKYGNDLTELAKRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL
AQRIVRGDVPEPLLNRKLISLDMGSLLAGAKYRGDFEERLKAVLKEVTASNGQIILFIDE
IHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALERRFQQVYCG
QPSVEDTVSILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDKAIDLVDEAAA
KLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLGKLENDLNTLKQKQKELT
EQWDHEKALMTRIRSIKEEIDRVNQEMEAAEREYDLTRAAELKYGTLMSLQRQLEEAEKN
LAEFQMSGKSLLREEVTDLDIAEIVNKWTGIPLSNLQQSERDKLVLLEKELHKRVIGQDI
AXKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKTLAGFLFNTENAXVRIDMS
EYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVFNILLQLLD
DGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSTHDSKDAVYNVMKKQVVELARQTF
RPEFMNRIDEYIVFQPLDSKEISKIVELQMVRLKDRLQQKKIDLHYTKEAVELLGTLGFD
PNFGARPVKRVIQQLVENEVAMGVLRGEFKEEDSIVVDVKSSPSAKDLPPQDKLCIKKLE
SSSPLDVMVAGD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagaaggctatcaaggtgtgctatctcagccgttaaagcatccaaagcatca
actccctacctcgttcgcgctcgcgccatctccgcctctgcttatactttgcgtaattcc
ctcactttgtctcattggcctacaaatatcaatgaagtcgcagggagaaatggcggctcc
ttctctctcactcgcagcttccactcttcccttctacgcaactcttctgccactacccct
gcgcagatcaaccaatcagagtacactgatatggcgtgggagggtcttgttggggccgtt
caagtggcaagggatagcagacagcaaatggtggaatctgaacacttactgaaagctctt
ttagaacaaaaggatgggttggctagaaggattttcacaaaagcagggcttgataacaca
tctgtcctgcaggctaccgatgactttatatcaaagcagcctaaagtgatggacacaagt
aatcctgtaatgggatcacatcttagctcccttttagacaattctcggaagcataagaaa
gaaatgggagatgattttctttcggtggaacattttgtcctggcgtttatgtcggataag
agattcgggcagcagttattcaagaacctccagcttagtgagcaggctctgaaggatgcg
gttaaagctgttcgtgggaatcagcgtgtaactgatcaaaatcctgaaggaaaatacgag
gcactcgacaaatacgggaatgacttgactgagcttgctaagcgtggaaaactggatcct
gttattggacgtgatgatgaaataaggcgttgtatccagatactatcgaggcggacaaaa
aataaccctgttataattggtgagcctggtgtgggcaaaacagcaattgctgaaggattg
gctcaaaggattgtgcggggtgatgttccagaaccgctgttgaaccgaaagttgatctct
ctagatatgggttccttgttggctggtgccaagtatcgtggagattttgaggaaaggttg
aaagctgtgctgaaggaagtcactgcttcaaatggccagattattttgttcattgacgag
attcacacagttgttggtgcaggggctactggtggtgcgatggatgctggaaatttgtta
aagccaatgctggggagaggtgagctccgatgcataggagctactacattaaatgagtac
aggaaatacattgagaaggatcctgctcttgagcgcagatttcaacaagtctattgtggt
cagccatctgttgaagatacggtatctatacttcgaggtttgcgtgaacggtatgagctg
catcatggcgttaaaatatcggacagcgctcttgtttcagctgcagttcttgcagaccga
tatataacagaacgttttctgcccgacaaagctattgatctagttgatgaggcagctgca
aagcttaagatggagatcacttctaagcccacagagctggatgagatagatagagctgtt
ctgaagttggagatggagaagctgtcccttaaaaatgacactgataaagcttccaaagaa
aggttaggcaagctggaaaatgatttgaatacgctgaaacagaaacagaaagagttaact
gaacagtgggatcatgagaaggctctcatgactaggatccgatctataaaagaagagatt
gatagagttaatcaagagatggaagctgctgagcgtgaatatgatttaactcgtgctgct
gagcttaaatatggaactttgatgtctcttcaacgtcagttagaagaggctgaaaagaac
ctcgctgagttccaaatgtctgggaaatccttgctccgtgaagaggttactgatcttgat
atcgccgaaattgttaacaaatggactggcattcctttatcaaacctccaacaatcagaa
agggacaagctagtcttgctggaaaaggaacttcataagagagtaattggtcaagatatt
gctngtaaatcagtagccgatgcaatcagacgctcgagagcaggattatccgacccaaat
cgtccaatagctagtttcatgttcatgggtcctactggcgttggcaaaactgagcttgcg
aagactttagctggtttcctttttaatacagagaatgctnnggtcagaattgatatgagt
gaatacatggaaaagcatgcagtgtcacgcttggtaggggcgccacctggctatgttggt
tatgaggagggtggacaactcaccgaagttgttcgtcgaaggccctattctgtagttcta
tttgatgaaattgagaaagctcatcatgacgtatttaatatcttactccagttattggac
gatggaaggataactgattctcagggaaggactgtcagttttacaaattgtgttgtaata
atgacatcaaatatcggctctcactacattctggaaactctccaatctacacatgacagc
aaggatgctgtttacaatgtgatgaaaaaacaggttgtggagttggctagacaaactttc
cgcccggaattcatgaaccgtatcgacgagtatattgttttccagcctcttgactccaaa
gaaataagtaaaatagttgagttacagatggtgcggttaaaagatagattgcaacaaaag
aaaatcgatttgcactacacgaaggaagctgttgaacttctggggactctgggttttgat
cccaactttggagcaaggccagttaagagggtgatacaacaattagttgagaacgaagtt
gcaatgggggtgttgagaggagaattcaaggaggaagactcgattgtcgttgatgtcaag
tcctcgccttcagcaaaggaccttcctccccaggataagttatgcatcaagaaattggag
agcagttctccattagatgttatggttgcaggtgattag
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