Hibiscus syriacus (Rose-of-Sharon): 120197928
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Entry
120197928 CDS
T09559
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120197928
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120197928
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120197928
NCBI-ProteinID:
XP_039055260
LinkDB
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Position
Unknown
AA seq
448 aa
AA seq
DB search
MAVTNKWAFASLALLFLLLVGAMATARTGNASSNVETEKEQSSKNSTTAAARSEEVEPLN
EHAVPDPEAVAAEVESIIAMNIRNVTERRNLGFFTCGTGNPVDDCWRCDADWQKNRKRLA
DCGIGFGRNAIGGRDGRFYVVTDPNDDDPVNPKPGTLRHAVIQDEPLWIVFKRDMVIQLR
QELIMNSFKTIDGRGANVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFG
WRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHMTHHNEVMLLGH
SDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYAAPTNPFAKEVTKRVETPANQWNNWNWRSEGDLLLNGAYFTPSGAGASASYARAS
SLGAKSSAMVGAMTSNAGALPCRRARQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggttacaaacaagtgggctttcgcctctttagctcttctatttttgcttcttgtc
ggagcaatggccactgcacggaccggcaacgcttccagcaatgtggaaacggagaaggag
cagagctcaaagaactcaacaactgcagcagctaggtccgaagaggttgagccattgaac
gagcatgctgttcctgacccagaggcagtagcagccgaggtcgaatctatcattgccatg
aatatccgcaatgtgactgaaaggaggaatttggggttcttcacgtgtggaaccggcaac
cccgttgatgattgctggcgttgtgatgcagattggcagaagaaccggaagagacttgct
gattgtggcattggtttcggaaggaatgctatcggtgggcgtgatgggcgtttctacgtt
gtcactgaccctaacgacgatgaccctgttaacccgaaacctggaaccttgcgtcatgcc
gtgatccaggacgagcctctttggattgtgttcaagagggacatggtgattcaactgagg
caggagctgattatgaacagttttaagaccattgatggtcgtggggccaatgtccacatt
gccaatggggcgtgtatcacgatccagtttgttaccaatgtgattatccatggtcttcac
atccatgactgtaagcctactggcaacgccatggtgagaagctcaccgtctcactttggg
tggaggacgatggctgacggtgatgcgatctccattttcggttcaagccacatttgggtt
gatcataactccctctctaattgtgctgatggtcttgttgatgctgtcatgggctcaact
gccattaccgtctccaacaaccacatgacccaccacaatgaggtgatgttgctaggtcac
agtgactcgtacacaagggacaaacagatgcaagtgaccatcgcttacaaccatttcgga
gagggactgatccagagaatgccaaggtgtaggcatgggtatttccatgtggtgaacaat
gactatacacactgggaaatgtatgccattgggggaagtgcaaaccccaccatcaacagc
cagggtaacagatatgcagctccaacaaatccatttgcaaaggaggttactaagagagtg
gagacacctgcaaatcagtggaacaactggaattggagatcagaaggagacttgttgctg
aatggtgcttacttcactccatctggagctggagcctcagccagctacgccagagcctca
agcttgggagccaagtcctccgccatggttggggccatgacttccaatgccggcgctctt
ccttgccgccgagccagacaatgctag
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