Hibiscus syriacus (Rose-of-Sharon): 120200170
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Entry
120200170 CDS
T09559
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120200170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120200170
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120200170
Spliceosome [BR:
hsyr03041
]
Complex B
Other components
Prp19-related factors
120200170
Complex C
120200170
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120200170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
HAT_Syf1_M
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
120200170
NCBI-ProteinID:
XP_039057003
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MASKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQ
KITDPTELGDYRLRKRKEFEDLIRRVRWNTSVWIKYAQWEESQKDFNRARSVWERALEVD
YRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI
FERWMSWMPDQQGWLSYIKFELRYNEVERACAIYERFVQCHPKVGAWIRYAKFEMKNGEI
VRARNVYERAVEKLADEEDAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEEEVRKNPLNYDTWIDYIRLEESVGNKGRIRE
VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYRECLKLIPHEKFSF
AKIWLLAAQFEIRQLNLKGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKY
LDWAPENCYAWSKYAELERSLSETERARAIFELAITQPALDMPELLWKAYIDFEISEGEY
ERTRGLYERLLDRTKHLKVWISYAKFEASAIEETVADSDVPEDGVWEHESKKGCVQRARR
VFERAINYYRTSAPELKEERAMLLEEWLNMESSFGELGDVSVVQSKLPKKLKKRKQITSE
DGSVSGYEEYIDYVFPEENQATNLKILEAAYKWKKQKHSTDDE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaagatgcagatccgtcactcgggtacttgactcgtaaagacacagaggtc
aaacttcctcgacctactcgtgtcaaaaacaaaactccggctcccattcagattaccgct
gaacaaattctccgagaagctcgggaacggcaggaggcagaaatccggccgcctaaacaa
aagattactgacccaactgaactaggtgactatcgcctccgcaaacgcaaggaatttgaa
gacctaatccgtcgtgttcggtggaataccagcgtttggatcaaatacgcccaatgggaa
gagtcccaaaaggacttcaatcgagcacggagcgtttgggagcgtgctctggaagtcgat
taccgaaaccacactttatggctgaaatacgcagaagtggaaatgaagaacaagttcatc
aaccacgcaaggaatgtttgggaccgtgcggtcacgctcctcccacgtgtggatcagctc
tggtacaagtacatccacatggaagagatgttagggaatgttgctggagctcgccagatt
ttcgaacgctggatgtcgtggatgccagaccagcaaggttggctttcctacattaagttc
gagcttcgttacaatgaagtcgagcgcgcttgtgcaatttatgaacggtttgttcagtgc
caccccaaagttggagcctggattagatatgccaaattcgagatgaagaatggggagatt
gtacgggcaaggaacgtgtacgaacgtgcggtggagaagctggcagatgaagaagatgca
gaacagttatttgtagcttttgctgagtttgaggaacgatgtaaggaaacagaacgtgct
cgctgtatttacaagttcgctcttgatcatatacccaaagggagggcagaggatttgtat
aggaagtttgtggcttttgagaaacaatatggagataaggaaggcattgaggatgcaatt
gtagggaagcggagattccaatatgaagaagaagtgagaaagaatccattaaattatgat
acgtggatcgactatataagattagaagagagcgtagggaataaagggaggattagagag
gtttatgagagggctattgctaatgttccaccagctgaggagaagcgatactggcaaaga
tatatttacttgtggattaattatgctttatatgaggagcttgatgctggggatatggag
cggacacgagatgtgtacagggagtgccttaagcttattccccacgagaagttttctttt
gcaaagatctggcttcttgctgcacaatttgaaataagacaactcaatctcaagggtgca
cgacaaattttgggaaatgccattggaaaagctcctaaagataagatctttaagaagtat
attgaaattgagctgcaacttggtaatattgatcgttgccgaaaattgtatgagaagtat
ctagattgggcacctgagaattgctatgcatggagcaaatatgccgagttagaaagatca
ttatctgaaacagagcgggcaagagctatttttgagcttgccatcacacaaccggctttg
gacatgccggagttattgtggaaggcatacatagattttgagatttctgaaggtgaatat
gaacgaaccaggggattgtacgagagacttttggatcgtacaaagcacttgaaggtgtgg
attagttatgccaagtttgaagcctctgcaattgaggagactgttgcggattcggacgtg
ccggaagatggggtttgggaacatgaatcaaagaagggatgcgttcagcgtgcaagaaga
gtctttgaaagagcaatcaactactatagaacatcggcaccagaattgaaagaagagcgt
gctatgctcctggaagagtggcttaacatggaaagcagttttggcgagcttggcgacgtt
agtgttgtccagtccaagttacccaagaaactcaaaaagaggaagcaaattacaagtgaa
gatggcagtgtttccgggtatgaagaatatatcgattatgtattccctgaagaaaaccag
gcgacgaacctcaagattttagaagccgcttataaatggaagaaacaaaagcattctacc
gacgatgagtag
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