Hibiscus syriacus (Rose-of-Sharon): 120211719
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Entry
120211719 CDS
T09559
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120211719
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsyr00535
]
120211719
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120211719
Meiosis-specific proteins
Cohesin complex and associated proteins
120211719
Proteoglycans [BR:
hsyr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120211719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
120211719
NCBI-ProteinID:
XP_039066141
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MFIKQIIIEGFKSYREQIATEPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNFDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARRKLE
EVEEARTKVSEKSSERYNAVLDSHERLKELDKMSKDLTKELQGLNKDKEALEIQQAEAIK
KQTALELDVKDLEERMSGNMQAKDDAIKQLRMLQNEIQESTEELNRIKPLYDNQLKKEEN
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQREIEDFEKVLYSNSLQEQKLQEEI
FGLNEELERLDGSIERRQAEIKELESSISKSRFNSQKTERDKLQDQRKSLWEKENKLSAE
IDKLKSEVEKAEKSLDHATPGDVRRGLNSIRKICREYNIGGVFGPIIELLNCDEKFFTAV
EVTAGNSLFHVVVETDEISTQIIRHLNSLKGGRVTFIPLNRVKAPHVSYPQSSDVIPLLK
KLNFSSKFAPAFAQVFGRTVICRDIDVATRVARTDGLDCITLEGDQVSKKGGMTGGFYDY
RRSKLKFMNIVIHSTKSINKKEEELKGISMELQKLEQQITAFVTEQQQLDAKRVLDKSLL
EQHKQDIANANKQKQYTSKALENKRKSLADVQMQIDQLRASMGAKRAEMGTELIDHLTPE
EKDLLSRLNPEITDLKEELINCRSDRIETESRKAELETNLTTNLKRRKQELEAIISAAEA
DALLDEAESKRQELMDAKLLVEDATQQLKRVSDRIDELTKQLRGIKDEKNDLKGLEADYE
STLQNEAKELEQMLSRKSSLLARQEEFSKKIRELGPLSSDAFETYKRKQIKELQKMLHRC
NEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIKELIAVLDQRKDESIERT
FKGVARHFREVFSELVQGGHGHLVMMKKKDGDHAAEDDDDDEPREVDLEGRVEKYIGVKV
KVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGN
MIRRLADMANTQFITTTFRPELVKVADQIYGVTHKNRVSRVNLVSKEDALDFIEHDQPQN
TD
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaaacagattattattgaagggttcaaaagctacagggagcagattgctact
gagcctttcagtccaaaagttaattgtgttgttggtgctaatggttctggcaaaacaaat
tttttccatgcaattcgttttgttttgagtgacctgttccaaaatctgcgcagtgaagat
agacatgctctactacatgaaggtgcaggacaccaagttgtatctgcatttgtggagatt
gtttttgataattttgacaatcgtatcccggttgacaaggaggaggtacgcctacgtcga
acaattgggttgaagaaggatgagtatttcttggatggaaaacatattacgaaaacagaa
gttatgaatttactggaaagtgctgggttctctcgttctaatccctattatgttgttcaa
caaggcaagatagcatcattaacgctgatgaaagattctgagaggctggacttgctgaaa
gaaatcggtggtactcgagtttatgaggagagacgtcgtgaaagcttgaaaatcatgcag
gaaactggcaataaaaggaagcaaattatacaagttgtccagtacttagatgagagattg
agagaattggacgaagagaaagaagagcttagaaagtatcagcagcttgacaagcagaga
aagtcactagaatataccatttatgataaagaacttcaagatgcacggcgtaaattggaa
gaggtagaagaagctcgtaccaaggtttctgaaaaatcatctgaaaggtataatgctgtg
ctggattctcatgaaaggttaaaggaattggacaagatgtctaaagatttaacaaaggag
cttcaaggtttaaacaaagataaagaagccttggaaattcaacaagcagaagcaataaag
aagcaaactgcgcttgagcttgatgtaaaagatttagaagagaggatgtctgggaacatg
caagccaaagatgatgcaatcaaacagcttcgaatgctgcagaatgaaatacaggagtca
acagaggagcttaacaggattaaaccgctctatgacaaccaattaaaaaaggaggagaat
ataacaaaagggatcatggagcgtgaaaagcaacttagcatcctctatcagaaacaaggt
cgtgctactcagttttctagtaaagctgctcgtgataaatggcttcaaagggaaattgag
gatttcgaaaaagtgctttattcaaattcactgcaggagcaaaaacttcaggaggaaatt
tttgggctcaatgaggagttggagcgcttggatggttctattgaaagacgccaagctgaa
atcaaagagttggaatcttcaatttccaagtctcggtttaattctcagaaaacagaaaga
gataagctgcaggatcaaaggaagtccttatgggagaaagaaaataagctttctgctgaa
attgataaactgaaatcagaagttgagaaagcagagaagagccttgatcatgcaactcct
ggagatgtaagaagggggttgaattctattcggaagatatgcagagaatataatataggt
ggagtgtttggtccaattattgagctgcttaattgtgatgagaagtttttcactgcagtt
gaagtaactgctggaaacagtttatttcatgtggttgttgaaacggatgagatatcaact
cagataattcgacatcttaattcactgaaaggagggcgtgttactttcataccacttaac
cgtgtgaaggctccgcatgtttcatatccacaaagttctgatgtgatacctctgttaaag
aaattgaacttttcttccaaatttgctccagcctttgcacaggtgtttggtagaacggtg
atctgccgagacatagatgttgctacaagagttgctcgaactgatggtctggattgcata
actttggaaggtgatcaagttagcaagaagggtggtatgactgggggattttatgattat
aggcgctcaaaattgaagttcatgaatatagttatacatagcacaaagtctattaataag
aaggaagaagaactgaaaggaatcagcatggagcttcaaaagttagagcagcaaatcaca
gcttttgtcactgaacagcagcaacttgatgctaagcgggttcttgacaaatcattgctg
gagcagcataagcaggacattgctaatgctaataagcaaaagcaatatacatctaaagct
cttgaaaataagagaaaatcacttgcagatgtgcagatgcaaattgatcagcttagagct
agtatgggagcgaaacgagccgaaatgggcacagagcttattgatcacttaacacctgaa
gagaaggaccttctgtcaagattgaaccctgagataacagatcttaaggaggaacttatc
aattgcaggagtgatcgcattgagactgaatcgagaaaagctgaactcgagactaatctc
acaaccaaccttaagaggcggaaacaagagttggaagcaataatatctgcggcagaggct
gatgcattgcttgatgaagctgaatcaaagaggcaggaattgatggatgcaaaattattg
gttgaagatgccacacagcaacttaaaagagtttctgatagaattgatgagctaacaaag
caacttaggggaatcaaagatgagaagaacgatctgaagggattggaagctgattatgag
agcacacttcagaatgaagcaaaagagttggaacaaatgttaagtagaaagagcagtctt
cttgctaggcaggaagagttctcaaagaaaataagggagttgggccctttgtcatcagat
gcttttgaaacatataagcgaaagcagataaaagagttgcagaaaatgcttcataggtgc
aatgagcaactgcaacagttcagccatgttaacaagaaagcacttgaccagtatgtaaat
ttcacagagcaaagagaagaactgcagaaaaggcaggctgagctggatgcaggtgatgag
aaaattaaggaacttatagcagttctagatcagcgcaaggatgagtcaatagaacgaact
ttcaaaggtgttgcccgacactttagagaagtattttcagaacttgtgcaaggtggtcat
ggtcatttggtgatgatgaagaaaaaggatggtgatcatgctgccgaagatgatgatgat
gatgaacctcgagaggtggatttggagggaagagttgagaaatacattggtgtaaaagtg
aaggtttcctttaccgggcaaggtgagacgcaatcaatgaagcaattgtctggaggacag
aaaactgttgtagcccttacattaatttttgcgattcaacgatgtgatccggctccattt
tatctgtttgatgaaatagatgcagctctagatcctcagtaccgaactgcagttggaaat
atgattcgtcgactggcagacatggcaaatacgcaattcataaccaccacatttcgacca
gagcttgtcaaagttgctgatcagatctatggtgtgactcataaaaacagggtgagccgt
gttaatcttgtctccaaggaagatgcgctagattttatcgagcacgatcagcctcaaaat
accgattaa
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