KEGG   Hibiscus syriacus (Rose-of-Sharon): 120213697
Entry
120213697         CDS       T09559                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120213697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120213697
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120213697
 Complex B
    120213697
 Complex C
   U2 SnRNP specific factors
    120213697
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N Vesi_VP2
Other DBs
NCBI-GeneID: 120213697
NCBI-ProteinID: XP_039067689
LinkDB
Position
Unknown
AA seq 509 aa
MSSTLLEVTRAAHEDVERLERLIVKDLQNDPPTSKDRLYQSHRVRNNIDTIIATTEKLVE
IYEDKDSARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANEEYEALL
KEEPVIEFSGEEAFGRYLDLHELFNQYINSKFGAKIEYSAYLDIFSQPHNIPWKLKSTKQ
YREYMENLLEYLIYFFQRTEPLQDLDRIFSKVEVEFEEQWTNGQVQGWEKQGPENEDDPM
QHAVIDLDYYSTVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFFTKHTPLDKLDKK
HFAKGSHGPRQNGSSAVSQDINSLKHVVLMEAKMKKLCDLLSKTIEQTKENVVKKQALTY
EEMEQEREEEETQVDTESDDDDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITNIEEAQELWEKIRERQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactcgaggtgactcgggctgctcacgaagatgtggaacgtcttgag
cggctcattgtgaaggacctgcaaaatgatccgcctacatccaaagaccgattatatcaa
agccaccgcgtccgcaataatatcgacacaatcatcgccaccacggagaagctggttgag
atatatgaagataaagatagtgctaggaaagatgaaatcgcggctctcggaggtcaaaca
gctaccggaattaatgtatttagtgctttttatgatagattgaaggagattcgggagtac
catagaaagcaccctgctgcccgtgtcgttgatgctaatgaagagtatgaggctttactt
aaagaggaaccagtaattgagttcagcggagaggaagcctttggtcggtatctggatctg
catgaattgttcaatcagtacattaattcaaaatttggagccaaaattgaatactcggct
tatctggatatcttttcacagccacacaatatcccttggaaactgaagtcaacaaagcaa
tacagggagtacatggagaatttgttggagtatctaatttacttctttcagaggactgaa
ccactgcaagatcttgacagaatcttttccaaggttgaggttgagtttgaggagcagtgg
actaatggccaggttcaaggatgggagaaacaaggtccagaaaatgaagatgatcctatg
cagcatgcagtgattgatctagattattacagcacagttgaagagttgatggaagtgggt
ccagaaaagttaaaggaggcattggcagcattaggactaaaaactggtggtactgttcag
cagcgcgccgagaggcttttcttcaccaagcatacacctttggacaagctggacaagaaa
cattttgcaaagggctcacatggacctcgacaaaatgggtcctctgcagtttcacaggac
attaacagtctgaaacatgttgtattgatggaagccaagatgaagaaactctgtgattta
ctgagtaagacaatcgaacaaacaaaagaaaatgtggtaaagaagcaagcgttgacatat
gaggaaatggaacaagaacgtgaagaggaagagacacaagttgacactgaaagtgatgat
gatgatcaacagatctataatcctcttaaattgccaatgggttgggatggaaagcctata
ccttactggctttacaaacttcacggtcttggtcaggaatttaagtgcgagatttgtggg
aactatagctactggggacgacgagctttcgagaggcatttcaaagaatggcggcatcaa
catggcatgcgatgccttggtattcctaacaccaagaacttcaatgaaattaccaatatt
gaggaagcacaagaactgtgggagaagatacgagaacggcaaggagtgaacaagtggcgc
cctgatcttgaagaagaatacgaagataaagaaggcaacatctataacaagaagacatat
actgatttgcagcggcaggggctcatttaa

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