Hibiscus syriacus (Rose-of-Sharon): 120217517
Help
Entry
120217517 CDS
T09559
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120217517
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120217517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120217517
NCBI-ProteinID:
XP_039070533
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MLPFTCILWICILASIPSFSRAAFNLTLPHQHPDPESVALDVQWSLNASLSRKRALSVHE
KDQCQTGNPIDDCWRCDPDWYNNRQRLADCSIGFARGTLGGKDGRIYTVTDSSDHDTVNP
KPGTLRHAVIQDEPLWIVFSTNMVIKLKHELIFNSYKTIDGRGANVHITGNGCLTLQYVS
HVIIHNIHVHHCRPSGNTDISSSPTHVGRRGRSDGDGISIFGSQKIWVDHCSLSYCTDGL
VDAVMGSTGITISNSYFSHHDEVMLLGHDDRYLPDSGMQVTIAFNVFGEALVQRMPRCRR
GYIHVVNNDFTSWKMYAIGGSGNPTINSQGNRYTAPGDASAKEVTKRVDTDEDWADWNWR
TDGDIMVNGAYFVPSGAGKMTQYIKASSVDPKSAVLVEQLTSKAGVFGESREETGSFSSP
GYSGTTNTGNGGSDSDGNFFGMIFGSGAPPPPPSRSMVSMFWSFLIILLLHSITNQGALP
LLLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctccctttcacctgcattctctggatatgcatcttggcttcaattccttcattttca
agagctgccttcaatctcaccctccctcatcagcaccctgaccctgaatctgttgctctt
gatgttcaatggagcttaaatgcatccttatctagaaaacgagccttgtccgtacacgaa
aaagaccaatgccagaccggaaaccccatcgacgattgctggagatgcgacccagattgg
tacaacaaccgccaacgcttagccgactgctccatcggcttcgcccgaggcacgctcggc
gggaaagacggtcggatctacaccgtcaccgactcgtccgatcacgacaccgttaacccc
aaaccgggcacgctccggcacgccgtcatccaagacgagccgctttggatcgttttctcg
accaacatggtcatcaagctgaaacacgagctcatcttcaactcttacaagaccatcgat
ggtcggggcgccaatgttcatataaccgggaacgggtgtttgacgttgcagtatgtttcg
catgtcatcatacataacatccatgtccaccattgtaggccttcggggaacaccgacatc
tcttcgtcgccgacgcatgtggggcggagaggtagatcggacggcgatgggatctcaatt
ttcgggtctcagaaaatctgggtggatcattgctcgttgagttactgcaccgatggattg
gttgatgctgttatgggttccactgggattaccattagcaatagctatttttctcatcat
gatgaagttatgctcttgggacatgatgacaggtatttgccagattcagggatgcaagtg
acgatagctttcaatgtgttcggagaagcactggtgcaaagaatgccgaggtgtaggaga
gggtatatacacgtggtcaacaatgatttcacatcatggaaaatgtatgccatcggcggt
agcggtaatcccaccatcaacagccaagggaatcgttacactgcgccgggggacgccagt
gctaaagaggtgacgaagcgagtggatacagacgaggactgggcagactggaactggaga
acagatggggacataatggtaaatggagcgtactttgtgccgtctggtgctggcaaaatg
actcagtacattaaagcttccagtgtggaccctaaatcggccgtcctcgttgaacagctc
acttcaaaggctggcgtttttggtgaatccagggaagagactgggagcttttcttctccg
gggtactccggcacaaccaacactggcaatggcgggtccgacagtgatggcaacttcttc
ggaatgatattcgggagtggagcaccaccgcccccaccatcccgatcaatggtttcaatg
ttttggtcttttctaattattctgttattgcattcgatcaccaaccaaggtgctctgcca
ttattattattgtag
DBGET
integrated database retrieval system
