Halichoeres trimaculatus (threespot wrasse): 141790694
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Entry
141790694 CDS
T11192
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141790694 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141790694 (skic3)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
141790694 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_12
ANAPC3
ARM_TT21_C
TPR_Slam
HAT_Syf1_CNRKL1_N
PknG_TPR
Fis1_TPR_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
141790694
NCBI-ProteinID:
XP_074526833
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNIYQRLVELYASSDKTKCYEMIK
KLSDIYQSDKEYVKLAKVWQQLIQLKEEDGVDKKELLQLWQQMTQLLSDCLKEGEQDVET
QQHLITSFERAMVLMDPVPGEEHKKVSSDYVKCLSKLPQEETKMKEACESMMSHYPRESY
PLEVLCSHYLTKGEQSEDAISCFSRLLDLDPNSGLGHIGLGTKALQEGRYKDAIKDLAQG
LKKKSSSTGWYSLAEAQLKTHRYSDCALSCSQGLTLCDSENQELRVKLLRLKLEALVRSE
GEKAADQALETFAQIPGAGKDPALVALKGRAYLHKGQVDQALKDSSELLASDPDLAHGLV
LRGLAHIAQGKQQQAEESFLKAVSQSPDCGEYFFLLGKLYWDMGEETRKDRTKAQTHFLK
AAKLDPNLGCAFRYLGHYYREVARDLGRARGCYKKAFELDNDDAESGAASVDLCMEQNDM
DTALATLQSVIEKATPGSAKWAWMRRGLYHLKVGEHQKATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIHNLFKAVTLRPDLSCLWKLLGDACT
VVSRVSPNRAQVQVPAQLAGLDPNTQSHTLNQVQILKVGERCYARALKLMPNVSSLWYDL
GLNYYHQSSLTCTTEDNENSLLLEKAQQCLKKAIMMESENYSYWNALGVISMSKGVENYA
LAQHCFIKSTQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQALI
AERVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDKNNRDSELYRYNIVQMNAISA
AQVALSKYTERIQSDPVAFIMLGYLNEHLKLKRQALQAYQRAVELLQSMSSTEELAFALG
SYGRALCTSGQWEEAVHVYNSTPLQELSDLAGLALAYCRAGLLSESTNAYERALAVASSE
KEKAYILTALALLQHRQGNVDSAKTLLFKCSMLKEPISESLLCLCALGLVHSDATLTAAA
LSELLKQGSVSSNVTEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSRLV
PRYHPKKANGGAMAGQVACLFSMTQGKRALLYSGVNQLANGRHSGEDSHRNALKTMQRAV
LLCPDDPATWAGLMAACHTENTSCYLSGSAPHRLGLAQTLMSVVSEKVRSVEDIERPLAQ
ALEGWVLQQAVTGLMLGGQLEQAEALCSQVLAVSPEHPAVMLSLRQVQCQRLLVADAGTV
LPDSVLEQLNSTVMANPTNVGAWHWLAEVYRSQGLLVQAVMVYRQSLQLTSQLGLHSSQV
ASLLRLALLALGPSMAGIPGNDWANLILEATTEVLKLGSSPMALLFQALLQYVTKMAARE
TRRLLERLVYVSPQDFPVTVMQVASWYLLRHLFAKNDQELMNVLLEHAKMNGDQRLLEFH
LLLASTSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtgaaagctgcactgaaaagtgcgagagaggccataaaaaacaaa
gagtttaaagaagctctgaaacactgcaaggctgttttgaaacttgagaagaacaattac
aatgcatgggtgttcatcggcttggctgcaagtgagctggagcagccagatcaggcacag
acagcttacaaaaaggctgtggagctggagcccgagcagctcctggcatggcagggattg
gcaaatctgtatgagaaaactgaccagtgggatttcaaagtcgagcttcctaacatctat
cagaggcttgttgagctgtatgcaagttctgacaaaactaaatgttatgagatgatcaaa
aagctttcagacatctatcagtctgacaaagagtatgtgaagttagcaaaggtctggcaa
cagctcattcagctgaaagaggaagatggtgtggacaagaaagagttactccagctatgg
cagcagatgacccagcttctctcagactgcctcaaggaaggagagcaggacgtcgaaact
caacagcacttaatcacatcatttgagagggccatggtcctcatggatcctgtgccggga
gaggaacacaagaaagtctcgtctgattatgtcaaatgtctctcaaaacttccacaagaa
gaaaccaaaatgaaagaagcctgtgagtccatgatgtcccattacccccgggaaagttat
ccactagaggtgctttgttctcactacctcactaaaggtgaacaaagtgaggatgcaatc
agctgtttctctcggctcctggatcttgaccctaacagcggattaggtcacattggtctg
ggcaccaaagcactgcaagaagggaggtataaggatgctattaaagaccttgcacaagga
ttgaagaaaaagagctccagcacaggatggtacagtctggctgaggctcagttaaaaaca
cacagatattcagactgtgcgctctcatgctctcaaggtctgacactgtgtgattctgaa
aaccaggagctgagagtcaaactgctcaggctgaaacttgaagctttagtaaggagtgaa
ggagagaaggctgcagaccaggctttggaaacattcgctcagatacccggtgctggaaaa
gacccagctcttgtggccttaaaaggacgcgcttacctgcacaagggacaagttgatcaa
gcactcaaggactcttcagagctgctggcctctgaccctgacctggcccatgggttggta
cttagaggtcttgcacatatagctcagggaaaacagcagcaagcagaggagagttttctc
aaggcagttagccaaagcccagactgtggagagtattttttcttgctgggtaaactttac
tgggacatgggagaagaaacccgtaaagaccggacaaaagctcaaacacattttctgaaa
gctgctaagttggacccaaacctcggctgtgcgttccgctatctcggacattattaccga
gaggtggcaagagacctgggtcgggcgagaggctgttataagaaggcctttgagttggac
aatgatgatgcagagtctggagctgcctcagttgatctctgtatggagcaaaacgatatg
gacactgctttggcaacacttcagtctgtgatcgagaaagccactccaggctcagctaaa
tgggcttggatgagacgagggctttaccacctgaaggttggggagcatcaaaaagctaca
gccgatctccaggcagcgctgagagcagaccctgaggactgggtatgttgggagtgttta
ggcgaggcctacttaaaccgccggagcttcacagctgctctgaaggcctttggtaaagcc
caccagcttcaaccatcctccatttacagcgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcaaggaggcagttgcagagtatctgcagatcacagcacagcaggactat
gtccctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatggag
gactgcagagatgggggagccattgaccttattcaacaagccatacataacctcttcaaa
gctgtgacgctgcgtcctgacctgtcctgcctgtggaagctgctgggagatgcttgtact
gtagtcagccgagtgtcaccaaacagagcccaggtccaagtgcctgcccagctggcaggt
ttagaccccaacactcagagccacacactgaaccaggtccagatactcaaagtcggtgag
aggtgttacgcccgagctttgaagctgatgcctaatgtctccagcctttggtacgaccta
ggactcaactattatcaccagtccagccttacctgcaccactgaagacaatgaaaactct
ctgctcctggagaaggcccagcagtgtttgaagaaggccattatgatggaaagtgagaac
tattcctactggaacgccttaggagtgatttccatgagcaaaggtgttgaaaactatgcc
ctggctcaacattgcttcatcaagtcaacacaagtggagccaaataatgttgttgcatgg
accaaccttggtaccctgtatttaaagaaggacaatattgagcttgcacacgaggccttc
aaaattgcccagtccctggagccgctttatgtcaactgctggatcggacaggcactgatc
gctgagagagtgggaagctatgacactatggatcttttcaggcacaccactgaactcagc
acacatacggagggagtaaaaggttatgcctactgggtgtgctccaccctgctggataag
aacaacagagactctgagctgtaccgctacaacatcgtccagatgaacgccatctctgct
gctcaggtggcactgagcaagtacacagagagaattcagtctgatcccgtggctttcatc
atgctcggctacctgaacgagcatctgaagctgaagaggcaggccttacaggcgtatcag
agagcggttgagctgcttcagtccatgtcgtcaacagaagagcttgcttttgctctgggc
agctatggtcgtgcgctgtgcacatccggccagtgggaggaggcggtgcatgtttataac
tccactcctctgcaggagctcagcgatctggccggtctggccctggcttactgcagggca
gggctcctctcagagagcaccaacgcctatgaacgtgccttggctgtggcttccagtgaa
aaggagaaggcttacatcttgactgctctggctctccttcagcaccgacagggtaatgtg
gactcagcaaagactctgctgtttaaatgctcaatgttaaaggagccaatctcagagtct
ctgctgtgtctatgtgccctggggctggtccacagtgatgctacattaactgctgctgcc
ctgtctgagctgctgaagcagggttcagtttccagtaatgtcactgagcagcgatgtcta
ctaacctgtgctctgctggccctgcagggcaactacagcgcagtgcaaagagaggcctcc
agagctgtgcacagcaatcctggaaacccatcgctgtgggccctgctgtccagactggtg
ccacgataccatcccaaaaaggcaaatggcggagcgatggctggtcaggtcgcctgtctc
ttcagtatgactcaaggaaagagggcgttgttgtacagtggagtaaaccagctagctaat
ggaagacactctggagaagacagtcacaggaatgcactgaagactatgcagagagctgtg
ctgctctgtcctgacgatccagccacctgggcaggattaatggctgcctgtcacactgag
aacacttcctgttatctctctggttctgctcctcacagactgggactggcgcaaaccctg
atgtcagtggtatctgagaaagttcgttctgtggaggacatagagcgccctctagcccag
gctcttgaaggctgggtgctgcaacaggcagtgacaggtctcatgctgggcggacagctg
gagcaggcagaagccctctgctctcaggtactcgctgtatctccagaacatccagcagtg
atgctgtctctaagacaggtgcagtgtcagcggctcctcgttgcagatgccggcaccgtc
ctcccagactccgtgctggagcagcttaacagcacggtgatggcgaacccaaccaatgtt
ggggcatggcattggctggctgaggtgtatcgtagccaaggcctgttggtccaggcagtc
atggtgtacagacagagtttgcagctcacctcacagctgggcctacacagcagccaggtg
gccagcctgctccgactggccctgctagcccttggtccttctatggcaggcatcccagga
aatgactgggctaacttgatacttgaagccaccactgaggtcttgaagttgggttcatca
cctatggccctcctgttccaggctctgctccagtatgtgacaaagatggctgctcgggaa
accaggcgtttgttggagaggctggtgtatgtctcccctcaagacttccctgtgacagtg
atgcaggtggccagctggtacctcctcagacacttgtttgccaaaaacgaccaggagcta
atgaatgttcttttggaacatgccaaaatgaatggagatcaaaggctgctggagtttcat
ttgctgcttgcctcaacttcatcttga
DBGET
integrated database retrieval system
