Halichoeres trimaculatus (threespot wrasse): 141795932
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Entry
141795932 CDS
T11192
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141795932 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141795932 (cnot1)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141795932 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141795932 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
141795932
NCBI-ProteinID:
XP_074532819
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCANLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFVIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFGFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQEVSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSGLGMPAVNTDPFGTRKMSTPGLNPPTFQQSKMKASDLSQVWPEANQ
HFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEE
YRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAAL
DRFKNRLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSL
ALAHVQAQSQPGVPKASQPGQPSTLVTTTTTTTTVAKTTTITRPTPSSFKKDVPPSINTT
NIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQY
LVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLK
NLGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFR
PQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKLKSLE
EQLSAPKKETKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVY
ALAGLSPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIR
KDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQR
EMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVV
LTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWA
TDDVAQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVVLARNSRDGIAALGLLQK
AVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYN
VEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADL
FHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDD
PPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTE
MCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLN
KVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFH
ILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVEL
NKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPD
PFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSN
EPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRY
LFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLI
TFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acgaagaaaaattacagagccagccaacaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcgaaaccaaactttatctctactctctgttacgctatcgacaatcccctgcat
taccagaagagtttgaagccatcggcccacctattcactcaactgagtaaagttctaaag
ctcagcaaggtccaggaggtgatatttggccttgctctgctcaactccagcaacacagac
cttcgaggttttgctgcacagttcataaagcagaagctcccagacctcctgcggtcatac
gtcgacgccgatctcggaggaaaccaggaaggtggcttccaagacattgctatagaggtc
ttacacctactgctctcccatctactgtttggccagaagggagccagtggggtcgggcag
gagcagatcgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggattctg
ccagactcgggggagttagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaagttggttatggcttctgtgcaaatttggatgagtgcagaaacataatcatccagtat
ggggtgagggaggtgacagccagccaggtagccagggtcctgggtatgatggcccgtacg
cactccggcctcacagatggtatccctctgcaatccatctcagccccaggaagtggtatt
tggagtgatggtaaagacaagaacgatggttcacaggcacacacgtggaacgttgaggtt
ctcatcgatgttgtgaaggaagtgaatcccaacctgaacttcaaagaggtgacctatgaa
cttgaccatccaggctttgtaatccgggacagtaaaggcctgcatatagtggtgtatggc
atccagaggggactgggcatggaggttttcccggttgatctcatctaccggccctggaaa
cacgctgagggacagctatcgttcattcagcactctctgatgagtccagaggtgttctgc
tttgctgactacccctgccacactgtggctattgacatccttaaggccccaccagaggat
gataacagggagattgctacctggaaaagtctggacctggtggagagcctgctcaggctg
tctgaggtgggtcagtatgagcaggtgaagcagctctttggcttcccaatcaagcactgt
ccagacatgttggtgctggcgctgctgcagatctccacttcctggcacactctacgccat
gagctcatctcaaccctcatgcccattttcctgggcaaccacccgaactctgccatcatc
ctgcattacgcgtggcatggacagggacagtctccctccattcgtcagttaataatgcat
tcaatggctgagtggtacatgagaggggaacagtatgaccaggcaaagctttcacgcatc
cttgatgtagcccaggacctaaagtctctatcaatgttgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagagcacggggaaccgttcatccaggcgtgtgtgacattcctg
aagcggcgctgtccatctatcatggggggtctggccccagacaaggaccaacccaaaagt
gcccagctccccccagagaccttagccaccatgctggcctgcctgcaatcgtgtgctggg
agcgtgtcacaggaagtgtcagagactatcttgaccatggttgccaactgcagcaatgta
atgaataaagcccgacagccaccaccaggggtgatgccaaaaggacgtgcccccagtacc
agcagcctagatgccatctccccagtgcagatggaccctctttcaggcatgggttccttg
aaccttgggggcactgccacctctcacactcaaagcatgcagggtttcccaacctcacta
agttcagctttcagtaatccccaatccccagctaaggctttccctcctctctcaaaccca
aaccccagcacaccgtttgggggcataggcagcttgtcctcccagcttcctggtatggat
tcaggtcccttgggatccggcattggctctggtattggtagtggtctggggatgccagca
gtaaacactgatccttttggtaccaggaagatgagcacaccagggctgaacccgcccacc
tttcagcagagtaagatgaaggcctctgacctttctcaggtgtggccagaggcaaaccag
cactttagtaaggagatagacgatgaagcaaacagttattttcagcggatctacaaccac
ccacctcacccaaccatgtctgtggatgaagttctggagatgctgcagaggttcaaagac
tcaaccatcaagcgggaaagagaggtgttcaactgcatgctgaggaacttgtttgaggag
tacagattcttcccacagtacccagacaaggagctgcacattactgcctgcctttttgga
ggcattattgagaagggtcttgttacgtacatggctcttggtttggcccttcgatatgtt
ctcgaagccttaagaaagccctacggatccaagatgtattattttggaattgctgccctt
gataggtttaagaacaggctgaaggattaccctcaatactgtcaacatctggcctcgatt
gcccacttcttgcaattcccccaccacttacaagagtgtgtacagtatatcgagtatggc
caacagtcacgggaccctccggtgaagatgcaagggtccatcaccacccctggcagtctg
gcattggcacatgtacaagcccagtctcagcccggggtccccaaagcttcacagcctggc
cagcccagcaccctggtcaccaccaccacgactacaaccacagtggcaaagaccaccacc
atcacaagaccaacgcccagcagcttcaaaaaagatgtacctccttccatcaacacaacc
aacatcgacactctgctggtggccactgaccaaacagaaaggattgtagagcccccagag
aatgttcaggagaagattgctttcatcttcaacaatctttcccagtcaaacatgacacag
aaggttgaggagttaaaagagactgtgaaggaagagtttatgccctgggtgtctcagtat
ctggtaatgaagcgtgtcagcattgagcccaacttccacagtctctattccaactttttg
gacactctgaagaatcctgagtttgtcaagatggtcctcaatgagacttacaggaatatc
aaggttctgttgacctctgacaaggcagctgcaaatttctcagatcgctccctgctgaag
aacttgggtcactggttgggcatgattacactggccaaaaacaagcccattctttacaca
gacctggaggtgaagtctctgctgttggaagcctatgtgaaaggccaacaggaactgctt
tatgttgttccctttgtagcaaaagttttggagtccagtcttcgcagcatggtcttcaga
ccccagaacccctggaccatggccataatgaatgttcttgctgaactgcatcaagaacat
gacctcaagctgaatctaaagtttgagattgaagttctgtgtaagaacttgtctctggac
atcaacgacctcaaaccggggaacttactgaaggacaaagagaagctgaagagcctggaa
gagcagctgtctgcgccaaagaaggagacgaagcctccagaagagatgctgccagtttct
accacaggagactttgttccatttgcagctcctccatcaaccccagctgcaaccaccacc
acctgcacaaccactgggccccccactccacagttcagctatcatgacattaatgtgtat
gccttagcaggcctgtctccacacattaacataaatgtcaacatccctctgcttcaggcc
catcctcagctaaagcagtgtgtaagacagtcagtggagcgagctgtccaggagctggtt
caccccgtggttgaccgctctatcaaaattgccatgacaacctgcgagcaaatcatcaga
aaggactttgccttggattcagaagagtcccgcatgcgtgttgcagcccaccacatgatg
agaaacctgaccgctggcatggccatgatcacctgccgggagcctctgctcatgagcatc
gccaccaaccttaaaaacagctttgctgctgcactgcgggcaccaacccctcagcagagg
gagatgatggaagaggccgcagccaggattgcccaagacaactgtgaactggcatgctgt
ttcattcagaaaacagctgtggagaaggcaggtcctgaaatggacaagagacttgccacg
gagtttgagctgagaaagcatgcacgtcaagaaggccgtcgctactgtgatcccgtagtt
ctgacttaccaggctgagcgcatgcctgagcagatcagactcaaggtgggaggagtggac
cccaaacagctggctgtatatgaggagtttgcaaggaatgtaccaggtttcttacccagc
aatgatctctctcagcccactggcttcttggctcagcccatgaagcaacaggcctgggct
acagatgacgtggcccagatctatgataaatgcatggcagacttggagcaacatctccat
gccatccctccagctcttgccatgaaccccctcacccaggctctgcgcagcctgctggaa
gctgtggttttggcccgaaactcgagagacggcatcgctgctcttggcctgctgcagaag
gctgtggagggtcttctcgatgctactagtggggccgatgccgacttgctgctgcgctac
agagagtgccatctgctggtgcttaaagccctgcaggatggacgtgcctatggaccacag
tggtgcaacaagcagatcaccaggtgtctgattgaatgccgcgatgagtacaaatacaac
gtggaggcagttgagcttctgatcaggaaccatcttgtcaatatgcagcagtatgaccta
catctggcacagtcgatggaaaatggactacactacatggccgttgcttttgccatgcag
ttggtgaagcttctgctggtggatgaacgcagtgtgagccacgtcacggaggctgacctt
ttccacacaatcgagaccttaatgaggacctgtgcacactccagagcaaacgcacctgag
ggactcccccagctgatggatgtcgttcgctccaactatgaggccatgatcgaccgtgct
cacggtgggcctaatttcatgatgcactctgggatttcccaggcttcagaatatgatgat
cctccaggcctgagagagaaggcagagtacctcctgagagaatgggtcaacctgtatcac
tcagctgctgctggcagggacagcaccaaagctttctcagcctttgttggccagatgcac
cagcagggaatcctgaagacagatgatctgatcacaaggttcttccggctttgcacagaa
atgtgcgtggagatcagctatagggcacaagcagagcagcagcacaacccagcagccagt
gcagccatcatcagggccaagtgttatcacaacctggatgcctttgttagactcatcgcc
ctgctggtcaaacactcaggggaggccacaaacacagtgacaaaaatcaacctcctcaac
aaggtgctgggtatcgtggttggggtgttgatccaggaccatgatgtccgacagactgaa
ttccaacagctgccataccatcgaattttcatcatgctgctgctggagctcaacgctccc
gagcatgtcctcgagaccatcaactttcagacgctcacagctttctgcaataccttccac
atcctgagacccaccaaagcacctggctttgtttatgcctggctggaactcatctcccat
cgtatctttattgccaggatgctagcacacacaccacagcagaagggttggcccatgtac
gcacagctgctgattgatctcttcaagtacctggccccgttcctgaggaatgtagagctc
aacaaacctatgcaaatcctctacaagggcacactcagagtgctcctggtcctgctgcat
gacttcccagagttcctgtgtgactaccattacggcttctgtgatgtaatcccacccaac
tgcatccagctccgcaacctcatcctgagtgcctttccacgcaacatgaggctccccgac
cccttcacgcccaacctgaaggtggacatgctgagtgagatcaacattgctccacgcatc
ctcaccaacttcacaggtgtcatgccctcccagttcaagaaggatctagactcttatctc
aagactcgttcaccagtcactttcctgtctgagctgcgcagcaacctgcaggtgtcgaat
gagcctggaaaccgctataacatccagctgatcaacgctttggtgctgtacgtaggcacc
caggctattgctcacatccacaacaagggcagcaccccctccatgagcaccatcacacac
tctgcacacatggacatcttccagaacctggcagtggatctggacactgaggggcgctac
ctgtttctgaatgcgatcgccaatcagctgcgctaccccaacagccacactcactacttc
agctgcaccatgctctacctgtttgctgaggccaacacagaggccatccaggagcagatc
acaagggttttgttggagaggctgattgtgaacaggcctcacccatggggtctcctcatc
accttcatcgagctgatcaagaaccctgccttcaagttctggagccatgactttgtgcac
tgtgcccctgagattgaaaagctgttccagtctgtggcccagtgctgcatgggacagaaa
caggcccagcaggtgatggagggcaccggtgccagctag
DBGET
integrated database retrieval system
