Halichoeres trimaculatus (threespot wrasse): 141803287
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Entry
141803287 CDS
T11192
Symbol
col9a1c
Name
(RefSeq) uncharacterized protein col9a1c
KO
K08131
collagen type IX alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04510
Focal adhesion
htc04512
ECM-receptor interaction
htc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141803287 (col9a1c)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141803287 (col9a1c)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141803287 (col9a1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
htc00535
]
141803287 (col9a1c)
Proteoglycans [BR:
htc00535
]
Extracellular matrix (ECM) proteoglycans
Others
141803287 (col9a1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
141803287
NCBI-ProteinID:
XP_074543350
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MAFHSSGVTRKRPLPPLMSAYSPVYLALLALLFAPALGQLDLNRLDGDTVCPPIRSGQDD
LPGFDLITQFQLDVIPLKGVRKVDGSTALQVAYRLDREANFQIPTMLNFPRGFPDEYSFM
VTFRMIKNTVNKVWNVWQIVDEDGNKQAGLRLNGDQQALEYFLMGADGNLQTVTFPGLSV
LFNTKWHKVMIGVERDQVTLYVDCQPVDKKPIKGKGPVNTEGDTLIGRLDADPDASVVFE
LQWMLIHCDPKRAQRESCNELPATEMYANAEPDKSVQGPPGAPGPEGPRGPAGENGRDGR
DGLPGSPGSPGTPGSKGEQGEVGLPGQRGLPGLPGSSGLPGPMGPRGPVGERGLPGFPGP
QGPPGPSSEGPAGPPGKPGTPGDEGNIGPEGPAGPRGTPGSAGPPGPPGPPGPVGPPGAS
VEGSGEPCPAACPAGPQGLAGLPGMKGHRGADGEPGKDGIPGEKGDAGETGPQGPPGRMG
DDGQRGPIGFPGTPGEKGDKGPPGFNGVPGPTGPPGAPGLEGIRGRQGLEGPQGEEGAVG
PQGEQGPAGEKGDTGEPGKDGLDGLPGADGAKGEAGTPGAVGIRGIVGIPGLPGKQGVMG
PAGAKGDTGAEGPIGPVGLPGKAGEPGGDGEDGLPGAKGSTGETGKQGPVGPIGPQGIQG
DKGDKGDTGAKGMKGHTGYKGDQGPMGPMGPKGSQGDTGVAGDIGVKGDQGPPGVPGIKG
ERGEKGMRGATGDEGRPGQPGHEGLAGLMGPRGLEGEAGLPGAPGPRGLPGPKVSDEKLR
EMCSAVVEEQLAEFMKEMLKKPAAIGAPGTPGPAGPPGPPGAAGAAGAAGPPGATGPKGH
PGFFGLPGAPGKKGDAGEKGDKGDKGEDGIGTKGSPGAPGAPGAPGAPGIGKDGKDGERG
ETGSPGTPGASGPRGPSGPPGLCDPSTCNRLPPLYMVSGKKSAGYKNP
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggctttccacagctcaggcgtgacaagaaagcgcccgctgcctccgttgatgtcggcg
tactctcctgtctatttggctctgctggcccttctcttcgctccggcacttggacaacta
gacctcaaccgattggatggtgatactgtgtgcccaccaataagaagcggacaagacgac
cttccaggttttgatctgatcacccagttccagctggatgtgatccctctgaaaggtgtg
aggaaggtggacggctccactgcgctccaggtggcgtaccgcctggacagggaagcaaac
ttccagattccaaccatgctgaacttccctcgaggattccccgatgagtactccttcatg
gtcaccttccgtatgatcaagaacacagtgaacaaggtgtggaacgtctggcagatagtc
gacgaagatggcaacaaacaagccggcctgaggctgaacggggaccagcaggctctggag
tacttcctgatgggcgctgatggaaacctgcagaccgtcaccttccccggcctctcggtg
ctcttcaacaccaagtggcacaaagtgatgattggagtggaacgtgaccaggtcactctg
tatgtggactgtcagcctgtggataaaaaacccatcaagggcaaaggccccgtcaacaca
gagggagacactctcattggccggctggatgctgatcctgacgcctctgtagtgttcgaa
ctccaatggatgctgatccactgtgacccaaagagagcccagagagagagctgcaacgag
ctgcctgccaccgagatgtatgccaatgctgagcctgacaaatcagtccaaggcccccca
ggagcccctggcccagagggcccccgagggcccgcaggagaaaacggcagggacggaaga
gatggtctcccaggttctcctggcagcccaggcactcctggcagcaaaggcgagcaggga
gaggtcggtcttcctggacagagaggccttcctggccttccaggatcatctggtttaccc
ggcccaatgggtccaagggggcctgtaggagaacggggacttcctggttttcctggaccc
caaggtcctcctggcccatcaagtgaaggacctgctggcccaccagggaaaccaggaacc
ccaggagatgagggaaacatcgggcctgagggtccagctggacccagagggactcctgga
tctgcagggcctcctggacctccaggtccaccagggcctgtgggaccgcctggtgccagc
gttgaggggagtggggagccttgtcctgcggcttgtcctgctggacctcagggattggca
gggctaccagggatgaaggggcacagaggtgcagatggagagcctggaaaagatggaata
cctggagagaagggagatgcaggagaaacgggacctcaggggcctccaggtcgcatggga
gatgatggacaaagagggccgattggattcccaggaaccccgggagaaaaaggagataaa
ggtccccctggctttaatggtgtcccaggacccactggcccacctggagctcctggttta
gagggaatccgaggtcgtcaggggctggagggaccccagggtgaagagggagcggtggga
cctcaaggagagcagggtcctgcaggagagaaaggagacactggggagcctggtaaagac
ggcttggatggacttcctggtgctgatggtgcaaagggtgaggctgggactcctggagct
gtgggcatcagaggcatcgttggtattccagggctgccagggaaacagggagtcatggga
cctgcaggagcaaagggtgacactggtgctgagggacctattggaccagttggacttcct
ggaaaagctggagaacctggaggagatggagaagacgggttaccaggagccaaaggatca
accggagaaacaggaaaacagggaccagtaggacccataggtccccaaggtatacagggt
gacaagggagataaaggtgatacaggtgccaaagggatgaagggtcacactggatacaaa
ggagaccagggacctatgggaccaatggggccaaagggaagtcagggggacacaggtgtc
gcaggagacatcggggttaagggagatcagggccctcctggtgttcctggaatcaaagga
gagcgtggtgagaaaggcatgagaggagccaccggagatgaaggcaggccgggtcagcca
ggacatgagggtctggctggtctaatgggacctcgagggctggagggagaagcaggcctt
cctggagcaccgggccccagaggtctacctggccccaaagtgagtgatgagaagctccgt
gagatgtgctcagctgttgttgaagaacaattagcagagtttatgaaagagatgctgaag
aaaccagcagccattggtgcccccggtactcctggacctgcaggacctcctggcccccct
ggagcagctggagcagctggagcagcaggaccgccaggggccacaggtcctaaaggtcat
ccaggcttcttcggactacccggtgcaccaggcaaaaagggcgatgctggagaaaaagga
gacaaaggagataaaggagaggatgggataggaactaaaggaagcccaggtgcaccaggt
gctccaggtgctccaggtgctccaggcatcggcaaagacggcaaagatggagaacgtggt
gaaacaggaagccccggcaccccaggagcatctggtccaagaggaccttcagggccacct
gggctctgtgacccatccacctgtaacagacttccacctctctacatggtcagtgggaag
aagtctgctggctacaaaaacccatga
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