Halichoeres trimaculatus (threespot wrasse): 141808718
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Entry
141808718 CDS
T11192
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
htc04040
]
141808718 (scn1laa)
Ion channels [BR:
htc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
141808718 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
FraC
Zip
PFF1_TM
Neur_chan_memb
New_glue
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
141808718
NCBI-ProteinID:
XP_074551499
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MAYVTEFVNLGNFSALRTFRVLRAFKAISVIPGLKTIVGALFQSVKKLADVMILTVFCLS
VFALIGLQLFMGHLKQKCVREIKNTTFTTNGTDGNSTFDWDEYSENAENHYFLPGKRDPL
LCGNSSEAGQCPDGYICVQAGKNPDYGYTSFDSFGWAFLSLFRLMTQDYWENLYQQTLRA
SGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATFKEEEEKKREFEAMIAQLKQQ
QEDAQAAASAAAAESGGVDDKGGGTESSSGTSKLSSKSAKERRNRRKKRKEEEGKGADEK
FPKSESQDSIKKARCRFSVGANKLSYDMKCSAAHQADTTDTGDGTNPECMDFLDGPESRQ
RTQSVASVITSTVEELEESQQKCPPCWYSFAHTFLIWKCCPAWLKIKSVVHLIVMDPFAD
LAITICIALNTLFMAMEYQPMDPNFAKVLYVGNLVFTGIFTAEMVLKIIAMDPYYYFQEG
WNIFDAIIVSLSLIELSLEGVGGMSVLRSFRLLRVFKLAKSWPTLNSLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISKDCTLPRWHMNDFFHSFLIVFRVLCGE
WIETMWDCMEVAGATMCITVYMMVMVIGNLVVLNLFLALLLSSFSADKFIQNEGDEGDNN
LQIAIRRIQNGIAYTKSVLRSKYSRFCLRGKSKGKGDDKSLEELQKSLGPNGVPNHTIKE
FARNGNGDVTGVDKNGDKYIVSSWSEESMSFINNPSLTVTVPIAVGESDFENLNTEDFSS
LSSEALGCPVPIDPDNDDQFSSSEGSTVDGMAGGEGGESVEIDLEEAMEPDSCFPEGCVQ
KYKCCQVNVEVGRWRMWWTLRKTCFRIVEHNWFESFIIFMILLSSGALAFEDVYIEKRKT
IKVVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLDFLIVDVSTITHLKTLQNLL
DKLLCLKPASPVFQVSLVSLVANSLNYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNA
LLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYGCVNTTTNEHVSTLLVKNESDCGLY
NDSRWKNVKVNFDNVGFGYLALLQVATFKGWMEIMYAAVDSKSKGEQPEYESNLKMYMYF
VVFIIFGAFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPANKIQGYIFDLTTKQAFDVVIMVLIVLNMVAMMVETAEQSKSKQKVLKWINIVFVII
FTGECLLKMISLRQYFFINGWNIFDLVVVILSILGTFLSKIIEEYFVSPTLFRVIRLARI
GRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVRREQGIDD
LFNFETFGNSMICLFQITTSAGWNGLLDPILNTKDDCDSTMEHPGSSVKGDCGSPAVGIA
FFVSYIIICFLIVVNMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPRATQFIE
YKKLAEFADELEPPLRIAKPNKLELMSMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDI
LRAQMEERFMASNPSKVSYEPITTTLRRKHEDTSATVIQRAYRQYVALRNAERKSSDASS
DNIQKDEILIDDENLVSDNLRKTSGTNKGDLTPPTAPQHACNSVTANGNNKYEKDKSEKE
VVGKDVREQDI
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgtaacagagtttgtaaacctgggaaatttttcagctcttcgcacatttcga
gtgttgagagcttttaaagccatctcagttatcccaggcctgaagacaatcgttggtgcg
ttgttccagtcagtgaagaagctcgccgacgtgatgatcctcaccgtcttttgcctcagc
gtctttgcccttatagggttacagctgtttatgggacacttaaagcaaaagtgtgtgagg
gaaatcaaaaatactactttcacaacaaatgggacagacggcaattcaacattcgactgg
gatgagtattcagaaaatgcggaaaatcattatttccttccaggaaaacgagatcctctg
ctttgtgggaacagcagtgaagctgggcagtgtccagatgggtacatctgtgtccaagca
gggaagaacccagactacggctacaccagctttgattcatttggttgggcctttctgtct
ctgttcagactgatgactcaggattactgggaaaacctttaccagcagacgttaagagca
tctggaaagccctacatgatcttttttgtgctggtgattttcctcggctccttttacctg
gtcaacctaatcttggctgtagtggcgatggcctatgaggagcagaatcaggccaccttt
aaggaggaggaggagaagaagcgagagtttgaggctatgattgcgcagctgaaacagcag
caggaggatgctcaggcagcagcatctgcagccgctgcagagagcggaggagtcgatgac
aaaggcggaggcaccgagagctcctctggcacctcaaagctcagctccaaaagtgctaaa
gagaggcgcaacaggcggaagaaaagaaaggaggaagaaggcaaaggcgcggatgagaag
ttcccaaaatcagagtcccaggacagcataaagaaagctcgctgccgcttctctgtgggg
gcaaacaagctcagctatgacatgaaatgctcagccgcacatcaggctgacaccaccgac
acgggtgatggaacaaatccagagtgtatggacttcctggatggcccagagtcccgacag
agaactcaaagtgttgccagtgtcataaccagcacagtggaggagcttgaagagtcgcag
cagaagtgtcccccctgctggtacagttttgctcacaccttcctgatatggaaatgttgt
ccagcatggctgaagatcaagagcgtcgtccatctgatagtgatggatccatttgcagac
ctagccatcaccatctgtattgcactcaacacattgttcatggcaatggagtaccaacca
atggatccaaactttgctaaagtgctgtatgtgggcaatttggtgtttaccgggatcttc
acagcagaaatggtcctcaagatcattgcgatggacccatattattatttccaggaggga
tggaatatttttgatgcaatcattgtcagtttaagcttaattgagctttctttggaaggt
gtgggtggcatgtctgtcctcagatcatttagattgcttagagtatttaagctggctaaa
tcgtggcccactctcaacagccttatcaaaatcattggtaattcagtgggggctttgggc
aacctgactctggtgctggccataatcgtgttcatctttgctgtggtgggaatgcaactc
tttggaaagagctacaaggactgtgtgtgtaaaatatctaaggattgcacgctgccccgc
tggcacatgaatgacttcttccattcattcctcattgtgttccgagtgctttgtggagag
tggatagagaccatgtgggactgtatggaggtggctggagcgaccatgtgcatcactgtg
tacatgatggtcatggtcattggaaaccttgtggtgctgaacctgttcctggctctcctg
ctgagttcattcagtgctgacaagtttatacagaacgaaggcgatgagggagacaacaat
ctgcagattgccatccgacggattcaaaatggtatcgcctacaccaagtctgtgctgcga
agtaagtacagtcgcttctgtctcaggggtaagagcaaagggaagggtgatgacaaatca
ctggaggagctgcagaaatctttaggaccgaatggggtccccaaccataccatcaaggaa
tttgccaggaatggaaatggagatgtcaccggggtggacaaaaatggagacaaatacata
gtgagcagctggagtgaagagtcgatgtcttttatcaacaaccccagtcttactgtgact
gttccaatcgctgtgggagagtcggactttgaaaaccttaacactgaggacttcagcagc
ctctcatctgaggctctaggatgccctgtgcccatagatcctgacaacgatgaccagttt
agctcctcagagggcagcacggtggatggcatggcaggcggagagggaggagagtcagtg
gaaattgacctggaagaagccatggagcctgactcttgctttcctgaaggctgtgtgcaa
aagtacaagtgctgccaagtaaatgtggaagtggggcggtggaggatgtggtggactctg
agaaagacctgtttccggatagtggagcacaactggtttgagagcttcatcatctttatg
attttgctcagcagtggagcactggcatttgaagatgtctacattgaaaagaggaagacc
attaaagtagtgttggagtttgcagacaaaatcttcacctacatcttcattttagagatg
ttactgaagtgggtagcgtatgggtttgccaagtatttcacaaacgcctggtgctggttg
gacttcctcatcgttgatgtaagcacaataacacacttaaaaacacttcaaaatctttta
gacaagctgctgtgtcttaaaccggcctctcctgtgttccaggtctcactggtcagtttg
gtggcaaactccctgaactactctgatctcggtgctatcaagtctttgagaactctgcga
gctctgaggcccctgagagccttgtcacggtttgaaggcatgagggtggttgtcaatgcc
ctactgggagccattccctccattttcaatgtgctgctggtatgtctcatcttctggctc
atcttcagcatcatgggagtcaatttattcgcggggaagttctacggttgtgtcaatacc
acaacaaatgagcatgtcagcacattgttggtgaaaaacgagtcagactgtggtttgtac
aatgacagtcgctggaagaatgtcaaagtcaattttgacaatgttggctttggttacctt
gctctacttcaggttgccacattcaagggttggatggagatcatgtatgctgcagtggac
tctaaaagcaagggagaacaaccagagtatgagagcaacctgaaaatgtacatgtacttt
gttgttttcatcatatttggagccttcttcaccctcaatctttttattggtgtcatcata
gacaacttcaatcaacaaaagaaaaagctaggaggtcaagacatcttcatgactgaagaa
cagaagaaatattacaatgccatgaagaaactggggtcaaagaaacctcagaaacctatt
ccaagaccagcaaacaaaattcaaggatacatctttgacctgaccacaaaacaggcattt
gatgttgtgatcatggttctaattgtgttaaacatggtggctatgatggtggaaaccgct
gaacagtcaaaatcaaagcaaaaggttctcaagtggattaatatagtattcgtcatcatc
ttcactggagaatgtttgttgaagatgatctccctccgccagtactttttcattaatggt
tggaatatattcgacttggtcgtggtcatcctgtcaatcctcggtacgtttctctcaaaa
ataatagaggagtatttcgtttcaccgaccttgttcagagtcatccgattggctcggatt
ggccgaatccttcgtcttatcaaaagtgccaaaggaattcgaacgctgttgtttgccttg
atgatgtcactgcctgccttgttcaacattggtctcttgctcttccttgtgatgtttatc
tatgccatttttggcatgtcaaactttgcttacgtcaggagggaacaaggcatcgatgat
cttttcaactttgagacatttggcaacagcatgatctgcttgttccagatcaccacctca
gctggttggaacggcttactggatccaattctcaacacaaaggatgattgtgacagtact
atggagcatcctggtagttcggtcaaaggagactgtgggagccccgctgtgggaattgct
ttttttgtgagctacattatcatttgtttcctcattgtggtgaacatgtacattgcagtc
atcctggaaaactttggtgtggcaactgaggagagtgcggaccctctgagtgaggacgat
tttgagatgttttatgaggtttgggaaaggtttgatcctcgggccacacagtttattgag
tacaagaagttggctgagtttgcagatgagctggagccaccattgcgcatagccaagcct
aacaagctggaactgatgtctatggatctacctatggtgagtggtgaacgcattcactgc
ctggacatcctgtttgcattcacaaagcgtgttctgggcgagggtggggagatggacatc
ctcagagcgcaaatggaggagcgcttcatggcctccaatccttccaaagtgtcttacgaa
cccatcactaccaccctccgtcgcaagcatgaagacacatcagccactgtcatccagaga
gcgtacagacagtatgtagccctcagaaatgcagaaagaaaatcctctgacgcatccagt
gataacatccaaaaggatgaaatactaattgacgatgagaatcttgtctctgacaacctc
agaaaaacttctggcaccaataagggtgacctgacccctccaacagcgcctcaacatgca
tgtaacagtgtgacagcaaacgggaacaataaatacgaaaaagacaaaagtgaaaaggag
gttgttggcaaagacgtcagagagcaagatatttaa
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integrated database retrieval system
