Hydrogenobacter thermophilus: Hydth_0340
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Entry
Hydth_0340 CDS
T02106
Name
(GenBank) conserved hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
hte
Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Hydth_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hte03019
]
Hydth_0340
03012 Translation factors [BR:
hte03012
]
Hydth_0340
Messenger RNA biogenesis [BR:
hte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Hydth_0340
Translation factors [BR:
hte03012
]
Eukaryotic type
Release factors
Hydth_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
baeRF_family12
baeRF_family10
baeRF_family3
eRF1_3
baeRF_family5
Host_attach
Motif
Other DBs
NCBI-ProteinID:
ADO44743
UniProt:
D3DG56
LinkDB
All DBs
Position
346963..348183
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AA seq
406 aa
AA seq
DB search
MKSLKASLDTLTSFKPDKYMVISLYLKLSPEERADRKYLLTFKSMVKKQKEYLTKRDLDA
QVLQSLMEDFSRIEAYLSEIDNLKGCRGIAVFSSSRRGLFEVIKLPYVYRDRLMIAPNPQ
IREIAAIDEELGKIGILLIDRKHVKFYLMDLEGAYEVMDFLEPLVTRSHKFHSGGGLLKG
AQGAMKYAMPSRTSAPNMVQHSYGEYRFHMRIREEKHRLFKLANDALMEAWKEHKFDKLV
IGSDREDVKEIENHLHPYLHKIFMGYVQVNPTEVTDTKLKSTVIDFLLQKDREQEKELIK
QLEELQGRGLATNGTSHVIEQLAVGNVRMLLVPDGFEKPGYLCSQSHLPSLKPECPIEGE
LVYEVPDIVDEVIELALEERALVKVIVDPQLQKKIDGLAAFLRFPL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttaaaagcatctcttgatacgctcacatctttcaaacctgacaagtatatg
gtaataagtctttacctgaaactctctccagaagaaagagccgatcgcaagtatctttta
accttcaagagcatggtaaaaaagcaaaaagagtatcttacaaagagggatttagatgca
caggtgcttcaatctctgatggaagatttttcaagaatagaggcatacctctcggaaatt
gataacctaaagggatgcagaggtatagcagttttctcttccagcagaagaggacttttt
gaagtgataaaacttccctatgtttatagagacagactcatgatagctcccaacccccag
ataagagagatagcagccattgatgaagagctcggaaagataggcattttgctcatagac
aggaagcatgtaaagttctatcttatggacctggaaggcgcttacgaagtgatggacttc
cttgagcctcttgtgacgagatcccataagtttcacagtggtggtggactcctcaaaggc
gcgcagggtgctatgaaatacgccatgccttcaaggacctctgcccccaatatggtgcag
cactcttacggtgaatacagatttcatatgaggataagggaggaaaaacatagacttttt
aagttagccaacgatgctctgatggaagcatggaaagagcacaagtttgacaagcttgtg
ataggtagcgatagagaggatgtaaaagagatagaaaaccatctgcatccttaccttcat
aaaatttttatgggttatgtgcaagtaaaccccacagaggtcacagatacaaaacttaaa
tctacggtaattgactttctcttgcagaaggatagagagcaagagaaggagcttataaaa
cagctggaggagcttcagggtagaggacttgctacaaacggcactagccatgttatagag
cagcttgctgtgggaaatgtgaggatgcttttagtgccagatggctttgaaaaacctggc
tatctgtgttcccaatctcatttgccctctctaaagccagaatgccctatagaaggtgag
ctagtttacgaggttccagatatagtggatgaagttatagagcttgctctggaagagaga
gcccttgtaaaggtgatagtagaccctcagctgcagaaaaagatagacggactggcagcc
tttttaagattccctctatga
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