Hydrogenobacter thermophilus: Hydth_0489
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Entry
Hydth_0489 CDS
T02106
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte02024
Quorum sensing
hte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hydth_0489
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hydth_0489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hte03019
]
Hydth_0489
03036 Chromosome and associated proteins [BR:
hte03036
]
Hydth_0489
Messenger RNA biogenesis [BR:
hte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Hydth_0489
Chromosome and associated proteins [BR:
hte03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hydth_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
DUF5608
LSM
Motif
Other DBs
NCBI-ProteinID:
ADO44890
UniProt:
D3DGK3
LinkDB
All DBs
Position
482361..482603
Genome browser
AA seq
80 aa
AA seq
DB search
MPYKLQESFLNTARKRRVKVTIYLVNGVRLQGRVRSFDLYTILIEDGRQQTLVYKHAITT
IIPAEKLEIEFEEEGVPGAV
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccctataagctacaggagagctttctaaacacagcaaggaagagaagggtcaaggtg
accatatatttggtgaatggcgtcaggcttcagggaagggtaagatcctttgacctttac
accatacttatagaggacggtcggcagcagacgctggtttataagcacgccataactacc
ataatacctgctgaaaagcttgagattgaatttgaggaggaaggagtgccgggggctgtg
taa
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