Billgrantia tianxiuensis: EKK97_10180
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Entry
EKK97_10180 CDS
T08051
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htx
Billgrantia tianxiuensis
Pathway
htx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKK97_10180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htx03019
]
EKK97_10180
03400 DNA repair and recombination proteins [BR:
htx03400
]
EKK97_10180
Enzymes [BR:
htx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKK97_10180
Messenger RNA biogenesis [BR:
htx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EKK97_10180
DNA repair and recombination proteins [BR:
htx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EKK97_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHC49902
UniProt:
A0A6I6SK45
LinkDB
All DBs
Position
complement(2180400..2182400)
Genome browser
AA seq
666 aa
AA seq
DB search
MIDQTLQQVFGYDDFRPGQRPVIEAITAGRSAAAIFPTGSGKSLCYQLPALHLPHLTLVI
SPLLALMQDQLAFLARHGIAAASIDSGQSREETAAVMEGVKRGEIRILMVSVERLKNERF
RAFIRRVPISLLVVDEAHCISEWGHNFRPDYLKLPHYRHEFGIPQVLLLTATATPRVIAD
MRERFGIAEGDVTATGFYRPNLNLEVAPVPAETRARRLVEWLRPRLGGEPPQPTIVYVTL
QQTAERLAAYLSKAGFVATAYHAGLDAETRERIQRDFMAGQTPCIVATIAFGMGIDKADI
RNVVHFDLPKSVENYSQEIGRAGRDGQPSDCLMLAGRDHVNVLENFVYGDTPEPHGIRRV
IDELIEAAGSTRQWELVLNSLSQHSNIRPLPLKTLLVQLELRDIIAPRYSYFAEYRFRLH
DEPEALVSHFEGERSAFVQAILDASQRARTWFSLDFAALERLGEERGLNVERTRVLTALD
YFVAQGWMVLESKQMTEVYEVLRHDIDPAALTEELHAYFHDKERAEVERLHAMLALFESE
ACLSRRLAEWFGDTRAPERCGHCSACRGAIAHLPDPEPLEPLSSEAVARLAGELVQQLSV
SDEPHPATPDLLARFLCGLTSPLLTRLKARRLAGFGALEAYRYAEVRELAARSTWADGQA
SAAPMP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcaaacgttacagcaggtcttcggctatgacgacttccgccccgggcagcgc
cccgtcatcgaagcgataaccgccggccgttcggcggcggcgatctttcccaccggttcg
ggcaagtccctgtgctaccagttgccggccctgcacctgcctcacctgacgctggtcatc
tcgccgctactggcgctgatgcaggatcagttggcgttcctggcgcgccacggcatcgcc
gccgccagtatcgattcgggccagagccgcgaggaaacggcggcggtgatggaaggcgtc
aagcgcggcgagatccgtatcctcatggtctcggtggaacggctcaagaacgagcgcttt
cgcgccttcatccgccgcgtgccgatctcgctgctggtcgtggacgaggcccactgcatc
tcggagtggggccataatttccgccccgattacctcaagctgccccactaccgccatgag
ttcggcatcccccaggtactgctgctgaccgccacggccacgccgcgggtgatcgccgac
atgcgcgagcgcttcggcatcgccgagggcgacgtcaccgccaccggcttctaccgcccc
aacctcaacctggaagttgcgccggtgccggccgaaacccgggcgcgacgactggtcgag
tggctccgccccaggctgggcggcgaaccgccccagcccaccatcgtctacgtcaccctg
cagcagaccgccgaacgcctggccgcctacctgagcaaggcgggtttcgttgccaccgcc
taccatgccgggctcgacgccgaaacccgcgagcgcatccagcgcgacttcatggccggc
cagacgccctgcatcgtcgccaccatcgccttcggcatgggcatcgacaaggccgacatc
cgcaacgtggtccacttcgacctgcccaagtcggtggagaactacagccaggagatcggc
cgtgccggccgcgacggccagccctccgactgcctgatgctggccgggcgcgaccacgtc
aacgtgctggagaacttcgtctacggcgacaccccggagccccacggcatccgccgagtg
atcgacgagctgatcgaggcggccggcagcacacgccagtgggagttggtgctcaattcg
ctctcccagcacagcaacattcgcccgctgccgctcaagacgctgctggtgcagcttgaa
ctgcgcgacatcatcgcaccgcgctatagctacttcgccgagtaccgcttccgcctgcac
gacgagcccgaggcgctggtatcgcacttcgagggcgaacgcagcgccttcgtgcaggcg
attctcgacgcctcgcagcgtgcccgcacatggttcagcctcgacttcgcggccctcgag
cggctgggagaagagcgcggcctcaacgtcgagcgcacccgcgtactcaccgcgctggac
tatttcgtcgcccagggctggatggtgctcgagagcaagcagatgaccgaagtctacgag
gtgctgcgccacgacatcgacccggcggccctgaccgaggagctgcacgcctatttccac
gacaaggagcgggccgaggtcgagcgtctgcacgccatgctggcgctgttcgagagcgag
gcgtgcctgagtcgccggctggccgagtggttcggcgatacccgagcacccgagcgctgc
ggccactgctcggcctgtcgcggcgccatcgctcacctgcccgaccccgagccactagag
ccgctgtcgagcgaggccgtcgcacgactcgcgggcgaactggtgcagcaactgtccgtc
agcgacgagcctcatcctgccaccccagacctgctggcacgcttcctgtgcggcctgacc
agccccctgctcacccgcctcaaggcgcggcgcctggcgggcttcggcgcgctggaagcg
tatcgctacgcggaggtgcgggaactcgccgctcgctcgacatgggcggacggtcaagcg
tcggcggcgccgatgccatag
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