KEGG   Humibacter sp. BT305: DVJ78_11525
Entry
DVJ78_11525       CDS       T05558                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hum  Humibacter sp. BT305
Pathway
hum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DVJ78_11525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hum03021]
    DVJ78_11525
   03400 DNA repair and recombination proteins [BR:hum03400]
    DVJ78_11525
Enzymes [BR:hum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DVJ78_11525
Transcription machinery [BR:hum03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DVJ78_11525
DNA repair and recombination proteins [BR:hum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DVJ78_11525
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AXH35953
LinkDB
Position
2456702..2456962
AA seq 86 aa
MANNQGIIDPPIDELLSRVDSKYALVIFASKRARQINDYYADLHEGSLFDNVGPLVDSTI
DDKPLSVALHEINEDKLVVKPVAPTE
NT seq 261 nt   +upstreamnt  +downstreamnt
atggcgaacaaccagggcatcatcgacccgccgatcgacgagctcctctcgcgcgtcgac
tccaagtacgcgctcgtgatcttcgcgtccaagcgcgcccgtcagatcaacgactactac
gccgacctccacgagggcagcctgttcgacaacgtcggcccgctcgtcgactccaccatc
gacgacaagcccctctcggtcgcgctccacgagatcaacgaggacaagctcgtcgtgaag
ccggtcgctcccaccgagtga

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