KEGG   Humibacter ginsenosidimutans: FPZ11_02330
Entry
FPZ11_02330       CDS       T06119                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
huw  Humibacter ginsenosidimutans
Pathway
huw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:huw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FPZ11_02330 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:huw03400]
    FPZ11_02330 (uvrA)
DNA repair and recombination proteins [BR:huw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPZ11_02330 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FPZ11_02330 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_16 AAA_29 AAA_21 RsgA_GTPase APS_kinase DnaJ_CXXCXGXG PRK IIGP
Other DBs
NCBI-ProteinID: QDZ13783
UniProt: A0A5B8M067
LinkDB
Position
complement(473726..476617)
AA seq 963 aa
MSISKVQAHSKLSVRGARVHNLRNVDVEIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIFDYMRLLW
ARIGVPHCPICGEVIQRQTVQQIADQLMELERGTRYLVLSPVVKQKKGEFVDLFTELAAS
GYSRALVDGEQIQLSSPPTLKKQYKHDISVVVDRLVAGPDILTRLTDSLETALRLTDGLV
AVSFVDESGPDAVRTFSEKLACPNGHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
DELLLGDTSLSISEGVILPWSTQGKGLYQYYDKLLDGLARDLDFDLETPWDELPSAVRDA
ILRGKDFKVKVKWRNRYGRELSYTSGFEGVVPYIERQYLQAESDTQRQRWSEYLREVPCP
VCKGKRLKPEVLAVHIHGHSIADVADLSLADARDFMNTLELTDREQTIAAQVLREIKVRL
DFLIQVGLNYLSMGRAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IDTLVALRNLGNTLIVVEHDEDTIRTADWIVDIGPGAGEGGGHVVHSGTYDELLDNTESL
TGDYLAGRKAIETPSSRREVDPQRMLRVVGANANNLRNLTVDFPLGVFVAVTGVSGSGKS
SLVNDILYRVLANRLNGARKVAGKHTRVTGTDQLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFAETAEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
ARYNRDTLQVHYKGKNIAEVLDMPIEEAAEFFKPISAIHRYLKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQKRSNGRSVYVLDEPTTGLHFEDVRKLLHVLNGLLDKGNTVIVI
EHNLDVIKSADWIIDLGPEGGSGGGRVVATGTPEHVATVKGSHTGLFLREILETDSRAEQ
KTA
NT seq 2892 nt   +upstreamnt  +downstreamnt
gtgtcgatctcgaaagttcaagcgcattcgaaactgagcgtgcgcggtgcccgcgtgcac
aatctgcgcaacgtcgacgtcgagatcccgcgtgactcgctcgtcgtcttcacggggctc
tccggctcgggcaagtcatcgctcgcgttcgacacgatcttcgccgaggggcagcgcagg
tacgtcgaatcgctgtccgcctatgcacgccagttcctcggccaggtcgaccggcccgac
gtcgacttcatcgagggtctgagccccgcggtctccatcgaccagaagtccaccaaccgc
aacccgcggtcgacggtcggcaccatcaccgagatcttcgactacatgcgcctgctctgg
gcgcgcatcggcgtgccgcactgcccgatctgcggcgaggtcatccagcgccagacggtg
cagcagatcgcggaccagctcatggagctcgagcggggaacgcgctacctcgtgctcagc
cctgtcgtgaagcagaagaagggcgagttcgtcgacctcttcaccgagctggcggcatcc
ggttactcgcgagcgctcgtcgacggcgagcagatccagttgtccagccctccgacgctc
aagaagcagtacaagcacgacatctcggtcgtggtcgaccgtctcgtcgccgggccggac
atcctcacccgcctcaccgattcgctcgagacggcgctgcggctcaccgacggactcgtg
gccgtcagcttcgtcgacgagtcgggcccggatgccgtgcgcacgttcagcgagaagctc
gcctgccccaacgggcacccgatccagctcaccgagatcgagccccgcacgttctcattc
aacgccccgttcggcgcctgccccgaatgctccggtctgggaacacgcatgtcggtggac
gacgagctgctgctgggcgacacctcgctgagcatctcagagggcgtcatcctgccgtgg
agcacgcagggcaagggtctctaccagtactacgacaagctgctcgacggtctcgcccgc
gacctcgacttcgacctcgagacgccgtgggacgagctgccttccgccgtgcgcgacgcg
atcctgcgcggcaaagacttcaaggtcaaggtcaagtggcgcaaccgctacggccgcgag
ctcagctacacgtcgggtttcgagggcgtcgtgccctacatcgaacggcagtacctccag
gccgagtcggacacgcagcgccaacgctggtcggaatacctgcgcgaggtgccgtgcccg
gtctgcaagggcaagcggctcaagccggaagtgctggccgtgcacatccacggacactcg
atcgccgacgtcgccgacctcagcctggccgacgcgcgcgacttcatgaacaccctcgag
ctcaccgaccgcgagcagacgatcgccgcacaggtgctgcgcgagatcaaggtgcgcctc
gacttcctcatccaggtcggcctcaactatctgagcatgggccgcgctgcggcgacgctg
tccggcggcgaggcgcagcgcatccggctcgccacccagatcggatcgggactcaccggc
gtgctctacgtgctcgacgagccgagcatcggcctgcaccagcgcgacaaccggcgcctc
atcgacacgctcgtcgccctccgcaacctgggcaacacgctcatcgtggtcgagcacgac
gaagacaccatccgcaccgccgactggatcgtcgacatcggaccgggcgcaggcgagggc
gggggccacgtcgtgcactccggaacctacgacgagctgctcgacaacaccgagtccctg
accggcgactacctcgccggccgcaaggccatcgagacgccttccagcaggcgcgaggtc
gacccgcagaggatgctccgcgtcgtcggagcgaacgccaacaacctgcgaaacctcacg
gtcgacttcccgctcggcgtcttcgtcgccgtcacgggtgtgagcgggtccggcaagtca
tcgctggtcaacgacatcctgtaccgcgtgctcgccaaccggctcaacggggcgcgcaag
gtggcgggcaagcacaccagggtcacgggcaccgaccagctcgacaaggtcgtgcacgtc
gaccaggcgcccatcggccgcaccccgcggtcgaaccctgccacgtacaccggcgtcttc
gaccgcatccgcacgctcttcgccgagaccgctgaggcgaaggcacgcggctacctgccc
ggcaggttcagcttcaacgtgaagggcggccggtgcgaggcgtgctcgggcgacggcacc
atcaagatcgagatgaacttcctgcccgacgtctacgtggcgtgcgaggtgtgcggggga
gcgcggtacaaccgcgacaccctccaggtgcactacaagggcaagaacatcgccgaggtt
ctcgacatgccgatcgaggaggccgcggagttcttcaagccgatctcggccatccaccgc
tatctcaagacgctcgtcgacgtcggtctcggctacgtgcgcctcggtcagagcgcgacg
acgctgtccggcggcgaggcgcagcgcgtcaagctcgccaccgagctgcagaagcggagc
aacggccgcagcgtctatgtgctcgacgagcccaccacaggtctgcacttcgaagacgtg
cgcaagctgctgcacgtgttgaacggcctgctcgacaagggcaacaccgtcatcgtcatc
gagcacaacctcgatgtcatcaagtcggcggactggatcatcgacctcggtcccgaaggc
ggatccggaggcggccgcgtggtcgccaccggcaccccggagcacgtcgcaacggtcaag
ggcagtcacaccgggctcttcctgcgcgagatcctcgagaccgattcgcgcgccgagcag
aagaccgcctga

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