Humibacter ginsenosidimutans: FPZ11_02330
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Entry
FPZ11_02330 CDS
T06119
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPZ11_02330 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_02330 (uvrA)
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ11_02330 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPZ11_02330 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
AAA_21
RsgA_GTPase
APS_kinase
DnaJ_CXXCXGXG
PRK
IIGP
Motif
Other DBs
NCBI-ProteinID:
QDZ13783
UniProt:
A0A5B8M067
LinkDB
All DBs
Position
complement(473726..476617)
Genome browser
AA seq
963 aa
AA seq
DB search
MSISKVQAHSKLSVRGARVHNLRNVDVEIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIFDYMRLLW
ARIGVPHCPICGEVIQRQTVQQIADQLMELERGTRYLVLSPVVKQKKGEFVDLFTELAAS
GYSRALVDGEQIQLSSPPTLKKQYKHDISVVVDRLVAGPDILTRLTDSLETALRLTDGLV
AVSFVDESGPDAVRTFSEKLACPNGHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
DELLLGDTSLSISEGVILPWSTQGKGLYQYYDKLLDGLARDLDFDLETPWDELPSAVRDA
ILRGKDFKVKVKWRNRYGRELSYTSGFEGVVPYIERQYLQAESDTQRQRWSEYLREVPCP
VCKGKRLKPEVLAVHIHGHSIADVADLSLADARDFMNTLELTDREQTIAAQVLREIKVRL
DFLIQVGLNYLSMGRAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IDTLVALRNLGNTLIVVEHDEDTIRTADWIVDIGPGAGEGGGHVVHSGTYDELLDNTESL
TGDYLAGRKAIETPSSRREVDPQRMLRVVGANANNLRNLTVDFPLGVFVAVTGVSGSGKS
SLVNDILYRVLANRLNGARKVAGKHTRVTGTDQLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFAETAEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
ARYNRDTLQVHYKGKNIAEVLDMPIEEAAEFFKPISAIHRYLKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQKRSNGRSVYVLDEPTTGLHFEDVRKLLHVLNGLLDKGNTVIVI
EHNLDVIKSADWIIDLGPEGGSGGGRVVATGTPEHVATVKGSHTGLFLREILETDSRAEQ
KTA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatctcgaaagttcaagcgcattcgaaactgagcgtgcgcggtgcccgcgtgcac
aatctgcgcaacgtcgacgtcgagatcccgcgtgactcgctcgtcgtcttcacggggctc
tccggctcgggcaagtcatcgctcgcgttcgacacgatcttcgccgaggggcagcgcagg
tacgtcgaatcgctgtccgcctatgcacgccagttcctcggccaggtcgaccggcccgac
gtcgacttcatcgagggtctgagccccgcggtctccatcgaccagaagtccaccaaccgc
aacccgcggtcgacggtcggcaccatcaccgagatcttcgactacatgcgcctgctctgg
gcgcgcatcggcgtgccgcactgcccgatctgcggcgaggtcatccagcgccagacggtg
cagcagatcgcggaccagctcatggagctcgagcggggaacgcgctacctcgtgctcagc
cctgtcgtgaagcagaagaagggcgagttcgtcgacctcttcaccgagctggcggcatcc
ggttactcgcgagcgctcgtcgacggcgagcagatccagttgtccagccctccgacgctc
aagaagcagtacaagcacgacatctcggtcgtggtcgaccgtctcgtcgccgggccggac
atcctcacccgcctcaccgattcgctcgagacggcgctgcggctcaccgacggactcgtg
gccgtcagcttcgtcgacgagtcgggcccggatgccgtgcgcacgttcagcgagaagctc
gcctgccccaacgggcacccgatccagctcaccgagatcgagccccgcacgttctcattc
aacgccccgttcggcgcctgccccgaatgctccggtctgggaacacgcatgtcggtggac
gacgagctgctgctgggcgacacctcgctgagcatctcagagggcgtcatcctgccgtgg
agcacgcagggcaagggtctctaccagtactacgacaagctgctcgacggtctcgcccgc
gacctcgacttcgacctcgagacgccgtgggacgagctgccttccgccgtgcgcgacgcg
atcctgcgcggcaaagacttcaaggtcaaggtcaagtggcgcaaccgctacggccgcgag
ctcagctacacgtcgggtttcgagggcgtcgtgccctacatcgaacggcagtacctccag
gccgagtcggacacgcagcgccaacgctggtcggaatacctgcgcgaggtgccgtgcccg
gtctgcaagggcaagcggctcaagccggaagtgctggccgtgcacatccacggacactcg
atcgccgacgtcgccgacctcagcctggccgacgcgcgcgacttcatgaacaccctcgag
ctcaccgaccgcgagcagacgatcgccgcacaggtgctgcgcgagatcaaggtgcgcctc
gacttcctcatccaggtcggcctcaactatctgagcatgggccgcgctgcggcgacgctg
tccggcggcgaggcgcagcgcatccggctcgccacccagatcggatcgggactcaccggc
gtgctctacgtgctcgacgagccgagcatcggcctgcaccagcgcgacaaccggcgcctc
atcgacacgctcgtcgccctccgcaacctgggcaacacgctcatcgtggtcgagcacgac
gaagacaccatccgcaccgccgactggatcgtcgacatcggaccgggcgcaggcgagggc
gggggccacgtcgtgcactccggaacctacgacgagctgctcgacaacaccgagtccctg
accggcgactacctcgccggccgcaaggccatcgagacgccttccagcaggcgcgaggtc
gacccgcagaggatgctccgcgtcgtcggagcgaacgccaacaacctgcgaaacctcacg
gtcgacttcccgctcggcgtcttcgtcgccgtcacgggtgtgagcgggtccggcaagtca
tcgctggtcaacgacatcctgtaccgcgtgctcgccaaccggctcaacggggcgcgcaag
gtggcgggcaagcacaccagggtcacgggcaccgaccagctcgacaaggtcgtgcacgtc
gaccaggcgcccatcggccgcaccccgcggtcgaaccctgccacgtacaccggcgtcttc
gaccgcatccgcacgctcttcgccgagaccgctgaggcgaaggcacgcggctacctgccc
ggcaggttcagcttcaacgtgaagggcggccggtgcgaggcgtgctcgggcgacggcacc
atcaagatcgagatgaacttcctgcccgacgtctacgtggcgtgcgaggtgtgcggggga
gcgcggtacaaccgcgacaccctccaggtgcactacaagggcaagaacatcgccgaggtt
ctcgacatgccgatcgaggaggccgcggagttcttcaagccgatctcggccatccaccgc
tatctcaagacgctcgtcgacgtcggtctcggctacgtgcgcctcggtcagagcgcgacg
acgctgtccggcggcgaggcgcagcgcgtcaagctcgccaccgagctgcagaagcggagc
aacggccgcagcgtctatgtgctcgacgagcccaccacaggtctgcacttcgaagacgtg
cgcaagctgctgcacgtgttgaacggcctgctcgacaagggcaacaccgtcatcgtcatc
gagcacaacctcgatgtcatcaagtcggcggactggatcatcgacctcggtcccgaaggc
ggatccggaggcggccgcgtggtcgccaccggcaccccggagcacgtcgcaacggtcaag
ggcagtcacaccgggctcttcctgcgcgagatcctcgagaccgattcgcgcgccgagcag
aagaccgcctga
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