KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123396344
Entry
123396344         CDS       T11213                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03060  Protein export
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    123396344
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hvg02044]
    123396344
Enzymes [BR:hvg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     123396344
Secretion system [BR:hvg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   123396344
  Eukaryotic Sec-SRP protein
   123396344
SSDB
Motif
Pfam: SRP54 SRP54_N cobW Fe-ADH AAA_33 AAA_17 MMR_HSR1 APS_kinase Zeta_toxin ResIII nSTAND_NTPase5 AAA_19 AAA_22 CobN-Mg_chel ATP_bind_1 AAA_16 6PF2K nSTAND3 GTP_EFTU AAA_7
Other DBs
NCBI-GeneID: 123396344
NCBI-ProteinID: XP_044947235
LinkDB
Position
5H:complement(73572199..73574026)
AA seq 277 aa
MVLAQLGGSLSHTLARMTNATVVDERVLGDCLNEITRALLQADIQFDMVRDVQASVKRVV
YLGALAAGTDKRRVIKKAVFDELCNMLDAGKLAFAPKKGKPCVVMFVGLQGSGKTTTCMK
YAHYHQKIGFKPALVCADTFRAGAFDQLKQNATKIMVPFYGSYMESDPVKIVVEGVEMFR
KENCDLIIVDTSGRHKQEATLFEETRQVSEATKPDLVIFVMDGSIGQATFAHAQAFRQSV
PVGAVIVTKTDGHAKGGGALTVLVFTSLILHYPLGAI
NT seq 834 nt   +upstreamnt  +downstreamnt
atggtgcttgcgcagctcggcgggagcctctcccacacgctcgcacggatgacgaatgcc
acggtcgtcgacgagagggtcctcggcgactgcctcaacgagatcacccgcgctctcctg
caggccgacatccagttcgacatggtccgcgacgtgcaggccagcgtcaagcgcgtcgtc
tacctcggggcgctcgccgccggcaccgacaagcgccgcgtcatcaagaaggccgtcttc
gatgagctatgcaacatgttggatgccgggaagctcgccttcgctcccaagaaagggaag
ccgtgcgtggtcatgtttgttggtttgcaaggttctggaaaaactaccacttgtatgaaa
tatgcccattatcatcaaaagataggatttaaaccggcactggtttgtgccgacacattc
agggctggtgcttttgatcagctaaaacagaatgcgacaaagatcatggttcctttctat
ggaagctacatggaatcagacccagtaaaaattgttgttgagggcgtggagatgtttaga
aaagaaaattgtgatctcataattgtagatacaagtggaaggcacaaacaggaagcaact
ctgtttgaagagacgcgccaagtttcagaagcaacgaaaccggacctcgtaatatttgtg
atggatggtagcattggtcaggctacatttgctcacgcccaagcattcaggcaaagtgtt
ccggttggtgctgtaattgttacaaaaacggacggccatgcgaaaggaggtggcgcactt
accgtgttagtattcacttcccttatcttacactaccctcttggtgccatttaa

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