Hordeum vulgare subsp. vulgare (domesticated barley): 123397381
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Entry
123397381 CDS
T11213
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K08770
ubiquitin C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123397381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123397381
Ubiquitin system [BR:
hvg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123397381
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ribosomal_L40e
OTU1_UBXL
Ubiquitin_2
FOG_N
Motif
Other DBs
NCBI-GeneID:
123397381
NCBI-ProteinID:
XP_044947882
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All DBs
Position
5H:complement(574944710..575017517)
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AA seq
214 aa
AA seq
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MQIFVKTPRGKTVTLEVESSDTIGNVKAKIDGEEGVSPEQQRLIFGGKPLEEERSLADYD
IQYEQSSHIRLRLKLGMQILVKTPTGKTVILDVESTDTIGNVKAKIDGEEGVSPEQQRLI
FGGKPLEDERSLADYDVHKDSTLHLLLQLPGGFRGREGGWSTEKNMKVLAESYNANKKIC
RKCYARLPPGATNCRKKKCGHRNQLRPKKIWRLY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgccgagggggaagacggtgaccctggaggtcgagagcagc
gacaccatcggcaacgtcaaggccaagatcgatggcgaggaaggcgtgtctccggagcag
cagcgtctcatcttcggcgggaagccgctggaggaggagcgcagcctggccgactacgac
attcaatatgaacaatcctctcacattcgcctacggctaaagctcgggatgcagatcttg
gtgaagacgccgacggggaagacggtgatcctggatgtcgagagcaccgacaccatcggc
aacgtcaaggccaagatcgacggcgaggaaggcgtgtcgccggagcagcagcggctcatc
ttcggcgggaagccgctggaggacgagcgcagcctggccgactacgacgtccacaaggac
tccactctccacctgctgcttcagctgcccggcgggtttcgcggccgcgagggtggttgg
tccacggaaaaaaacatgaaagtccttgctgaaagctacaacgcaaataagaagatctgc
cgcaagtgctatgctcggctaccacctggggctacaaactgtcgcaagaagaagtgtggc
catcgcaaccagctgaggccaaagaagatctggaggctctactaa
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