Hordeum vulgare subsp. vulgare (domesticated barley): 123411053
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Entry
123411053 CDS
T11213
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
123411053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123411053
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123411053
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
123411053
NCBI-ProteinID:
XP_044959909
UniProt:
A0A8I6Z3R0
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Position
7H:450494730..450497521
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AA seq
365 aa
AA seq
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MGDALCDQLLVDVDGEFQLPTDAEDLFSILETWEDCVNGAAAALSPTAGAGSGGGLLGGS
APGNKGSSKRRARQGECDGISHEHKRQKCSPEEGGGAAPKTAHITVERNRRKQMNEHLTV
LRSLMPCFYVKRGDQASIIGGVVDYIKELQQVKQSLEAKKQRKAYTEHVLSPRPPPSSYS
PRLPLSPLHKSTPPLSPLLRSTPPLSPRLAVPISPARTPPTPGSPYKLRPLPPPISGSTY
VSPAMTPTGYEPGSSYLPSLDAIAAELSVYANRQALQLPPTDLLPDVRVEFAGANLVLKT
VSHRAPGQAVKIIAALESRAPALEILHAKISTIDDTDVNAFTVKIGIECSLSAEELVQEI
QQTFS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgcgctgtgcgatcagctcctcgtggacgtcgacggcgagttccagctcccc
accgacgccgaagacttattcagcatcctcgagacttgggaggactgtgtgaacggcgct
gcggcagcgttgagccccactgctggcgccggcagcggtggtgggctgctgggcggttct
gcgccggggaacaaaggcagcagcaagcggcgagcgcggcagggcgaatgtgacggaata
tcgcatgagcataagaggcagaagtgctcgccggaggagggaggcggcgcggcaccgaag
acggcccacatcacggtggagcgcaaccgccggaagcagatgaacgagcacctgaccgtg
ttgcggtcgctcatgccttgcttctatgtcaagcgtggtgaccaagcatccatcatagga
ggagtggtggactacatcaaggagctgcagcaagtgaagcagtcgctggaggccaagaag
cagcgcaaggcctacaccgagcacgtcctcagcccgcgtccaccgccgtcgtcctacagc
ccacgcctcccgctcagcccgctccacaaatccacgccgccgctcagcccactgctcagg
tccactccgccgctcagcccgcggctcgccgtcccgatcagccctgccaggacgccgccc
acgccaggcagcccctacaagctccggcccctgccgccgccgatttccggctccacctac
gtatccccggcgatgacgcctaccggctacgaaccgggctcctcctacctcccctcgctc
gacgcgatcgccgccgagctgtcagtgtacgccaacaggcaggcgcttcagctgccaccg
actgacctactccccgacgttagggtggagttcgccggcgcaaacctggtgctgaagacg
gtgtcgcaccgcgcgccggggcaggcggtcaaaatcatcgccgcgctcgagtcacgggcg
ccggctctggagatcctccacgccaagatcagcaccatcgacgacaccgacgtcaacgcc
ttcaccgtcaagattggaatcgagtgctcgctcagcgcggaggagctggtgcaagaaatt
cagcaaacgttctcataa
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