Hordeum vulgare subsp. vulgare (domesticated barley): 123413361
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Entry
123413361 CDS
T11213
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123413361
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hvg01009
]
123413361
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123413361
Protein phosphatases and associated proteins [BR:
hvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123413361
Spliceosome [BR:
hvg03041
]
Common components
Common spliceosomal components
SR proteins
123413361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_10
Motif
Other DBs
NCBI-GeneID:
123413361
NCBI-ProteinID:
XP_044962238
UniProt:
F2CVE1
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All DBs
Position
7H:complement(632142832..632147513)
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AA seq
247 aa
AA seq
DB search
MSHSNQVRYTARSITPPADRDSGSKSPPPRRRAASKSPPLPPPPPFPPKGVRTISSSPPP
TRRTVSRSPPPKRRARSRSRSRSRSRNRNRSRSRSRSRDKDQVRNPGNNLYVTGLSIRTQ
ETDLEKFFSKEGKVKDCRVVTDPRTKESRGFAFVTMENVEDARRCIKYLHHTVLEGRLIS
VAKARRTRERTPTPGEYCGPRGGRSRVEPRSRSPSRRSSRSSRDRSRSPAGRRDRDRDRN
SRDRKRD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccaaccaagtgaggtacaccgcgcgctccatcacgcccccggccgacagg
gacagcggctccaagtcgcccccgcccaggaggcgcgccgcttccaagtcccctcccctg
ccacctcctcccccttttcctcccaagggggtgcgcaccatctccagctcccctccgcca
acaagacgcaccgtctcaaggtcccctccaccaaagaggcgcgccaggtcaaggtcaagg
tccagatccaggtccaggaacaggaacaggagcaggagccgctccaggagcagagataaa
gaccaagtcaggaatcctgggaacaacctctatgtcactggactgtccatacggacacaa
gaaactgacctggagaagttcttcagtaaagagggcaaggttaaagactgccgtgtcgtt
acggaccctcgtaccaaggaatcacgtggctttgcgtttgtcaccatggagaatgttgag
gatgcaaggcgctgcatcaagtacttgcaccacactgtacttgaaggccgcctcatcagt
gtggcaaaggcaaggagaactcgtgagaggaccccaactcctggagaatactgtggtcca
agaggtgggcgctcccgagtggaaccgcggagccgttctccatctcgtcggtctagcagg
tcgtcgagggaccgctcgaggtccccggccggaaggagggacagagacagagacagaaat
agcagggacaggaagcgcgactga
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