Hordeum vulgare subsp. vulgare (domesticated barley): 123424994
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Entry
123424994 CDS
T11213
Name
(RefSeq) pumilio domain-containing protein C4G8.03c-like
KO
K17943
pumilio RNA-binding family
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
zf-RVT
Phage_capsid
Motif
Other DBs
NCBI-GeneID:
123424994
NCBI-ProteinID:
XP_044964607
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Position
2H:15351776..15361299
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AA seq
1037 aa
AA seq
DB search
MQNGILTTLRNCLTNVANVELASVLSLLQDVITNDVSHDRFLTHGSSFSFRCAYSLLSSD
HEIDFNAGDVWSSNAPIKVKIFGWLLCRDRLSMMANLHQKTITSDSTCPRCDLVLEDVTH
LTILFPCATHPGPAPAAPATHPHRALAAQHVLATAAPLCPFSGSPSLSVRPSVPLTCATP
DPYPPPPAYIYPRAHSLPPPLRSPKFSRSLPRPAPPPPLRPLKPLTLATAPPPPPPRSHF
RALHAGPGMAPFGDGGMGPGPFGDGGMGGGPFGDGGRRAFGNGGEDDAGWGWDPLRSGSA
PPTMDGALLAADGVLGGGIGGGGGGGGSGDSFFSGAGGLGARLDEVSRRRGAIDQDHYGN
SALLSKGVGGFQLNGTRGFDGQQFRPNHSTFDMGSTLTEHDAEFYGHQNHFMPDMGKINT
FGRRDFDSTYLSDSDLSDTFSGLRLSNRTPLDERRHEKELLDEMLMHRRYFNSNMADDSR
LPSADNVFHSPRSQHMDFRPTRRNCLRRQNSSIDAPNAPRMNHHHMDNVDHLSFAERLTL
MQSGNLRGEANYLRDAAMTNMMNPLSNRNNTITDLGLARNRKAYLEDHFARQCLQNESSF
VPKSGLSYSGNRLYHDEPCFPSSRAQRLGSHFHPNLGSIPCHDDQQSRLFSVNRRSAGRN
MGLQNNHDNAVEHCIDSFDRNSDETLELLDAVGHVMNVSVDQHGSRFIQQKLEEASAEDR
EKIFPEILANVIALTTDVFGNYVIQKFFEFATEGQLKQLADKLNGHIKALSGQMYGCRVV
QKVIEVVDMDTKIDIVSELMDSVLDCIGDQNGNHVIQKCIECVPEDRIPFVIEPILSQIC
KLCTHQYGCRVIQRVLEHCRKPATQSAVMNEIVQHAFALTEDKYGNYVVQHVLQHGKPEE
RSSIIQKLTGQMVILSQQKYASNVIEKCLAYGTPEERDVLIREIFSCGQTFQTLMKDQFG
NYVVQKVLQTCDDKYFEMILSSIKVHLNELKNYTYGKHIVARVEKLIITGENRVRMASKP
CRCQQEAKCTDAGADSS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatggtatactcactactctgcggaactgcctaaccaatgttgctaatgtagag
cttgcatctgttttgtctttgttgcaggatgtcatcaccaacgacgtgtcacacgatagg
ttcctcacccatggctcctcgttctccttcaggtgcgcctactcgctgctatcctctgac
catgagatcgatttcaatgccggagacgtctggagctccaatgcacctatcaaggtcaag
atcttcggctggctcctctgtcgtgataggttgagcatgatggcgaacttgcatcaaaag
accatcacctcggattcaacctgcccccgatgcgacctcgtgctggaggacgtgacgcac
ctcaccatccttttcccatgtgcgacgcatccggggccggcgcccgctgctccggcgacc
cacccccaccgggccctcgcggcccagcacgtgttagcaacggccgcgccgctttgtccc
ttctccggctcgccgtcactatccgtccgtccgtccgtgcctttgacctgcgccaccccc
gacccctatcccccgccgcccgcctatatataccccagggcccattccctgccgccgccg
ctccgctcccccaaattttcccgttccctcccccgtcccgcgcctccccctccgctccgc
ccgcttaaacccctaaccctagcgacagcgccgccgccgccgccaccgcgcagccatttc
cgcgctttgcacgcggggccgggcatggcgccgttcggggacggcgggatggggccaggc
ccgttcggcgacggcgggatgggcggcggcccattcggcgacggcgggaggcgcgcgttc
gggaacggcggggaggacgacgcggggtggggctgggacccgctgcgcagcggcagcgcc
ccgccgaccatggacggcgcgctgctggcggccgacggggttctcggcggaggaatagga
ggaggtggcggcggcgggggaagcggggattccttcttctccggggccggcgggctcggc
gccaggctcgacgaggtcagccggcggcgcggggccatcgaccaggaccattatggtaac
tctgcattactatctaaaggtgtaggaggcttccagcttaatggtaccagaggttttgac
gggcagcaatttagaccaaaccactccacatttgatatgggttcaacattgacggaacat
gatgctgaattttatgggcatcagaatcacttcatgccagacatgggaaagatcaacact
tttggaagaagggactttgattctacttatctctcagattctgatctttcagatactttc
tctggattgaggctatctaataggacaccacttgatgaaaggagacatgagaaagagctg
cttgatgaaatgcttatgcatcgcagatatttcaactctaatatggctgatgatagccgg
cttccttcagctgataatgtttttcactcacctaggtcccagcacatggattttcgcccg
acacgtcgaaattgcttacgtaggcagaacagttcaattgatgcccccaatgccccaagg
atgaatcaccatcacatggataatgttgatcacctatcttttgctgaaaggctaactttg
atgcagtcaggcaatttgcgtggggaggccaactatctccgtgatgcagctatgacaaat
atgatgaaccccttgagcaatagaaacaacaccattacagacttgggtttggctaggaat
cgtaaggcataccttgaggatcattttgcccggcagtgtctgcagaatgaaagtagtttt
gtaccaaaatctggtctctcttatagtggtaacaggctctatcatgatgagccttgtttc
ccctcttcaagagcgcaaagattagggtctcattttcatcctaatttggggagcattcca
tgtcacgatgaccagcaatcacggctcttctctgttaatagaaggtcagctggtaggaat
atgggcctacagaacaatcacgataatgctgtagaacactgcatagattcttttgataga
aacagtgatgaaaccttggagctacttgatgcagttggccatgtcatgaatgtcagtgtg
gatcaacatggcagtcggttcattcaacagaaactagaagaagcatctgctgaggatagg
gaaaagatcttcccagagatactggccaatgttattgctctaacaaccgatgtgtttggt
aattatgtgatccagaagttctttgagtttgctacagagggacagcttaaacagttagca
gataaactcaatggtcatattaaggctctaagcggtcagatgtatggttgcagagttgtt
caaaaggttattgaggtagttgatatggacacaaagattgatatagtttctgagctcatg
gattctgttctggattgtattggtgatcagaatggcaaccatgtaattcagaagtgcatt
gagtgtgttcctgaagatcgcattccatttgttatcgagcctatactatcacaaatttgt
aagctttgtactcaccaatatggctgcagagttattcagagagttttggagcattgccgt
aaaccagcgactcaaagtgctgtgatgaatgaaattgtgcagcatgcttttgctttgact
gaagataagtatgggaactacgttgttcagcatgtcctgcaacatgggaagccagaggaa
cggtcgtccattattcagaagctcacaggccaaatggtgatcttgagccagcagaaatat
gcatctaatgtcattgaaaaatgtttggcctatggtactcctgaagaacgtgatgtcctt
ataagggagattttttcttgtggtcaaacatttcagacactgatgaaagatcagtttggc
aactacgtcgtacagaaagtccttcagacctgtgatgacaaatactttgagatgatcctg
tcaagcatcaaggtgcacttgaacgaactgaagaactacacatatgggaagcatatcgtt
gcacgggttgagaagttaatcatcacaggagagaaccgggtgcggatggcgtcgaagccc
tgccgatgtcaacaggaggcaaagtgcaccgatgccggcgctgattcttcttaa
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