Hordeum vulgare subsp. vulgare (domesticated barley): 123428381
Help
Entry
123428381 CDS
T11213
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123428381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123428381
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
123428381
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123428381
Prokaryotic type
123428381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
123428381
NCBI-ProteinID:
XP_044968514
UniProt:
A0A8I6XFE2
LinkDB
All DBs
Position
2H:649432256..649438404
Genome browser
AA seq
310 aa
AA seq
DB search
MAPSPPTAPKTIADFFVRPAKRLRSGAAGTAAATVVVPAASLSPSSDHSPLSPEQRRRAD
TNLALARARRNLRLAESKAAGGAAKLEELLVEETWLEALSGELRKPYALDLCRFVAHERL
HAKVPVYPPPHLVFHALHTTPFHDVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLQN
IFKELHKDVGCTIPSHGNLERWAVQGILMLNTVLTVREHQANSHAKKGWEQFTDAVIKTI
SQKKSGLVFILWGNSAQAKIRLIDETKHHILKSAHPSGLSANRGFFGCRHFSQTNEILER
LGLSTIDWQL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcgccccccaccgcccccaagaccatcgccgacttcttcgtccgccccgcc
aagcgcctccgctccggcgcagccggcaccgccgccgccaccgtcgtcgtccccgccgcc
tccctctccccctcctccgaccactccccgctctcgccggagcagcgccgcagggccgac
accaacctcgcgctcgcccgcgcgcgccgcaacctccgcctcgccgagtccaaagcggcc
ggcggcgccgcgaagctggaggagctgctcgtggaggagacgtggctggaggcgctgtcc
ggggagctgcgcaagccctacgcgctcgacctctgccgcttcgtcgcccacgagcgcctg
cacgccaaggtgcccgtctacccgccgccccacctcgtcttccacgcgctccacaccacc
cccttccacgacgtcaaagccgtcatcatcggccaggatccataccatggtcctggtcag
gccatgggattgtcgttttcagtaccagaggggatcaaaattccttccagcttacaaaac
atatttaaagagctgcataaagatgtagggtgtactataccatctcatgggaatttggaa
agatgggctgtgcagggtattcttatgctcaataccgtgctaacagtgagggaacaccaa
gccaactcacatgcgaagaaaggttgggagcagttcactgatgctgtcatcaagacaata
tcacaaaagaaatcaggattggtctttattctgtggggaaactcagcccaagcaaagata
agattgattgatgaaacaaaacatcacattctaaaatccgcccatccgtcaggcctgtct
gcaaacagaggattctttggatgcaggcacttttcgcagacgaatgagatcctggagagg
ctcgggctatccaccatcgattggcagctctga
DBGET
integrated database retrieval system
