Hordeum vulgare subsp. vulgare (domesticated barley): 123442759
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Entry
123442759 CDS
T11213
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00600
Sphingolipid metabolism
hvg01100
Metabolic pathways
Module
hvg_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123442759
Enzymes [BR:
hvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
123442759
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
NifW
Motif
Other DBs
NCBI-GeneID:
123442759
NCBI-ProteinID:
XP_044974827
UniProt:
A0A8I6XK34
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Position
3H:complement(28870446..28875414)
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AA seq
539 aa
AA seq
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MEAAAELALRLRAAANGRLAGQEPLLLVAAPLLALLAARAVHAAAAHVADRGLRAVLITL
AMAALKLVPGVGGYIAAQKSKVVEQLQSGSASSKKNLRTELPAIGDPDGVIGELQALKDK
DVRWQGKCSGTVYIAGSESEGHFSLINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAA
LLGSKEKASGGQICGNMTSGGTESILLAVKTSRDYMQSKKGITKPEMIIAESAHSAYDKA
AQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASEY
GICLHVDLCLGGFVLPFARKLGYPVPPFDFSVKGVTSISTDVHKYGLAPKGTSTVLYRNH
EIRKHQFVAVTEWTGGLYVSPTMAGSRPGGLIAGAWAAMMSLGLNGYLESTGQIMEVSKK
IQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNALQRPNSLHICVTL
QHTAIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRGTVKELLVEFMDSSC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccgccgagctggcgctgcgcctgcgggccgccgccaacggccggctggcc
gggcaggagccgctcctcctcgtcgccgcgccgctgctcgcgctcctcgccgcgcgcgcc
gtccacgccgccgccgcccacgtcgccgaccgcggcctccgcgccgtcctcatcaccctc
gccatggccgcgctcaagttggtgccgggggttggcggatacatcgccgcccagaagagc
aaggttgttgagcagttgcagtcaggaagtgcatccagcaagaagaacctgcgaaccgag
ctgcccgccatcggggatcccgacggggtaataggcgagctccaggcgctcaaggacaag
gatgtgagatggcagggcaaatgctccggcaccgtttatatcgctgggagcgagtccgaa
ggccatttttcacttataaacaaggcctactctatgttttcacacacaaatccactgcat
caggatgtattcaagagtgtggcacagctagaggctgaagtagttgcaatgacagcagct
ttgcttggcagcaaagaaaaggcatctggtggacaaatttgtggcaatatgacgtcaggt
ggaacagaaagcatattattggctgtcaaaacatcacgtgattatatgcagtcaaagaaa
ggaatcacaaagcctgaaatgataattgctgaatcagctcattctgcctatgacaaagct
gctcaatatttcaatattaaagtgcggcgtgtacctgtgaataaagaatttcttgcagat
gtaaaaggattcaaacggtgcataaatggaaacaccataatgatggttggatctgcacca
ggatttccccatggtttaattgatcccatcgaggaacttggggagttggcttcagaatat
ggtatttgcttgcatgttgatctatgccttggtggcttcgtattgcctttcgcccgtaag
cttgggtaccctgttcctccttttgatttttctgtcaaaggtgttacgtcgatctcaaca
gatgttcataagtatgggctagccccaaaaggcaccagcactgtcctatacaggaatcat
gaaattagaaagcaccaatttgttgctgtgactgaatggactggtgggctctatgtttcc
cctaccatggctggaagcaggccaggtgggctaatcgcaggagcttgggctgcgatgatg
tctcttggattgaatggttacttggaaagtacgggtcaaatcatggaagtctcaaagaag
atacaaaaaggaattgatgatatctcaggtttatttgtgattgggaaaccagacatgact
gtcgtggcctttgggtcggacgcggtcgacatatttgaggtgaatgacataatgtcatca
aaaggatggcacctcaatgctcttcagagacccaacagtttgcacatctgcgtgacactt
caacacacggcaatttacgaggaattcctcaaggatctcgaggattctgtaaacaccgtg
aaagcgaatccagggcctatcagcggggggatggctccgatctacggcgcggctgggaag
atgccagacagaggcacggtcaaggagttacttgtagagttcatggacagctcttgctaa
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