Hordeum vulgare subsp. vulgare (domesticated barley): 123444393
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Entry
123444393 CDS
T11213
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hvg03110
]
123444393
Chaperones and folding catalysts [BR:
hvg03110
]
Heat shock proteins
HSP100
123444393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
ATPase_2
AAA_14
nSTAND3
IstB_IS21
bpMoxR
AAA_7
AAA_28
TniB
TsaE
DUF815
NACHT
RNA_helicase
Zeta_toxin
NBD_SMAX1
AAA_25
AAA_19
Mg_chelatase
ABC_tran
DNA_pol3_delta2
ResIII
T2SSE
DUF87
DASH_Spc19
DUF2987
DUF4426
Motif
Other DBs
NCBI-GeneID:
123444393
NCBI-ProteinID:
XP_044977025
UniProt:
A0A8I6X3D1
LinkDB
All DBs
Position
3H:483142449..483146329
Genome browser
AA seq
914 aa
AA seq
DB search
MNPDKFTHKTNEALAAAHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAA
VESFERVASTALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLIVGLL
EDPQISDALKEAGASAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL
VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTVSILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEREKDKASKARLVDVRKELEDLRDKLQPLQMKYRKEKERIDEIRSLKQ
RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIARLEGETGENLMLTETVGPDQIAE
VVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEMVIFDPLSHEQLRKVARLQ
MKDVAARLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIREEI
DENSTVYVDAAPGKDELTYGVDKHGGLVNASTGRKSDILIQVPSGAVGGGDAAHAVKKMK
VMQDGGDVDDMEEE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgacaagttcacgcacaagaccaatgaggcgctcgcggcggcgcacgagatg
gcgtccgaggccggccacgcgcagctcacgccgctgcacctcgccgccgcgctcgcggcg
gacaggtcgggcatcctccgccaggccattgcccacgcgtccggcggcaacgacgccgcg
gtcgagtcgttcgagcgcgtcgcgtccaccgcgctcaagaggctgccctcgcagtccccg
ccgcccgacaccgtcccggcgtccacctcgctggtcaaggccgtccgccgcgcgcagtcg
gcgcagaagtctcgaggcgactcgcacctcgccgtcgaccagctgatcgtgggcctcctc
gaggaccctcagatctcggacgcgctcaaggaggccggcgcctccgcggcgcgggtgaag
gccgaggtcgagaagctccgtggcggcgacaaccggcgcgtggagtccgcgtcgggggac
accaacttccaggccctcaagacgtacggccgcgacctcgtggaggtggcgggcaagctg
gacccggtcatcggtcgcgacgaggagatccggcgcgtggtgcggatcctgtcgcggcgc
accaagaacaaccccgtcctcatcggcgagcccggcgtgggcaagaccgccgtggtggag
gggctcgcgcagcgcgtcgtgcgcggcgacgtccccagcaacctcctggacgtgcgcctg
gtggcgctcgacatgggcgcgctcgtggccggcgccaagtaccgcggcgagttcgaggag
cggctcaaggccgtgctcaaggaggtggaggaggccgaggggaaggtgatactgttcatc
gacgagatacacctggtgctcggcgccgggcggacggagggttccatggacgcggccaac
ctgttcaagccgatgctcgcgagggggcagctcaggtgcattggcgccacgaccctcgag
gagtacaggaagtatgtcgagaaggacgcggcgttcgagaggcggttccagcaggtgttg
gtggcggagcccagcgtccccgacaccgtcagcatactcagagggctcaaggagaagtac
gagggccaccatggcgtgaggattcaggaccgcgcgctcgtcgtcgccgcgcagctctcg
gcgaggtacatcatgggccgtcatctgcctgataaagcaatcgatttggttgacgaggcc
tgcgcaaatgtgagggtgcagcttgacagccagcctgaagagatcgataacctcgagagg
aagaggatccagttggaagtcgagctccatgctctcgagagggagaaggacaaggctagc
aaagctcggctagttgatgtgaggaaagagttggaggatctgagggacaagctgcagccg
ctgcagatgaagtaccgcaaggagaaagagaggatcgacgagatcaggagcctgaagcag
cgccgcgaggagctgcagttcaccctgcaggaggccgagcgccggatggatttggcccgc
gtggctgatctcagatacggtgctctgcaggaggttgacgctgccatcgctaggctggag
ggcgagaccggcgagaacttgatgctcaccgagaccgtcggcccggaccagattgcagag
gtggtgagccgctggactggcattccggttaccaggctggggcagaatgagaaggcgagg
ctgatcgggctggctgaccggctgcatcagagagtggttggacagtatgaggccgtgaat
gcagtcggagaggctgttctacggtcgagggctggcctcggacggccacagcagcctact
ggctcattcctcttcctcggaccgaccggtgtgggtaaaaccgagctcgccaaggctctt
gccgagcagctgtttgatgacgagaacctgctcgtccgcatcgacatgtcggagtacatg
gagcagcattcggttgcccggctcatcggcgccccacctggttacgttggacacgaggaa
ggagggcagctgacagagcaagtgaggaggaggccgtacagcgtcatcctcttcgacgag
gttgagaaggcacatgtggcggtgttcaacactctgctccaggtcctggacgacgggcgg
ctgaccgacgggcaaggcaggacggtcgacttcaggaacaccgtgatcatcatgacctcg
aaccttggcgcggagcacctcctcgccggaatggtgggcaactccatgaaggttgctcgc
gatctcgtcatgcaggaggtgaggaggcatttccgcccggagctgctgaaccgtctggac
gagatggtcatcttcgaccccctgtcgcacgagcagctgcggaaggtcgcccggctccag
atgaaagatgtggcggcccgtctcgcggagaggggcgtcgctctggccgtcaccgacgcc
gccctcgacgtcatcctctcactctcttacgatccggtgtatggagctcggccgatccgg
agatggatcgagaagaggatagtgacggagctctccaagatgctgatccgcgaggagatc
gacgagaactccacggtgtacgtagacgccgcgcccggcaaggacgagctgacctatggc
gtcgacaagcacggggggctggtgaacgcaagcacgggccggaagtctgacatcctcatc
caggttcctagcggagctgttggcgggggcgatgcggcgcacgccgtgaagaagatgaag
gtcatgcaggacggcggagacgtggatgacatggaggaagagtag
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