Haloquadratum walsbyi C23: Hqrw_2154
Help
Entry
Hqrw_2154 CDS
T01942
Symbol
rad3a
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03022
Basal transcription factors
hwc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hqrw_2154 (rad3a)
09124 Replication and repair
03420 Nucleotide excision repair
Hqrw_2154 (rad3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_2154 (rad3a)
03400 DNA repair and recombination proteins [BR:
hwc03400
]
Hqrw_2154 (rad3a)
Enzymes [BR:
hwc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hqrw_2154 (rad3a)
Transcription machinery [BR:
hwc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hqrw_2154 (rad3a)
DNA repair and recombination proteins [BR:
hwc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hqrw_2154 (rad3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCC40051
UniProt:
G0LH17
LinkDB
All DBs
Position
complement(1213306..1216110)
Genome browser
AA seq
934 aa
AA seq
DB search
MSSQDSSTDQCPRSRSLEELPVTDAGQPTESTTRQTMCTDTVSDIDAGWTPYFRYDTIYA
DQRAAIESFLDTLGEQGYYLKEGACGTGKTLAAITASIHAIRNPKQLNDRSPTNASAPEY
DRVIAVTPVKKQLQQFIAELRGINATLPAETDPIQTVVLRGQADMMAIRNAELPKTDTQE
ATQDLRATTREVIRFNSDIPLDWPDNLSPPAYSMAEYDWSTPSEGAVQAQENHQYDPNRA
EAIRHIVAQLEPRDTESNAQLCIDGIETPYPQHVPHTSEIVDSTRLDSNYNQLPSDLQGR
FDPFYAATLAGLQESIVEFADAPSHVIDKQTLFEATVASGCCPHELMCILAQQADVIIGN
YNHLLDPETRYLTDRKLGLLNERTIAIIDEAHQLEERSRDNLSTSVDLYTLMKARNDVRI
ARQYASGSIVDSPTPNLPREDAELAQKIVEDGAKLRTSGIEVEELRAVEKLLNIAKQRLI
DASETIDAVGLIHRFGQEDSEAQSREIKSLVDPNNLNWGDQLTRDLERDESISMSVMQGA
ERIMSRLEKVFTAFTEHGILNRTPQGQEVGAFFRQWAQAPHAVYHPEVRVIPSQKESFPD
QFPAWVEHWTPELRLFNCIPKRELRRVFSELGSGILMSATLRPKEPFRESIGIDAVPQLG
ELDTKVQSTEDEMTLWMNGITDEMTEDVETRPTTFDRFPLRFSPKNRLSVVVDLPKFTKA
NRGERETNHQAMTDIREQYAEVIAQVARTEGNILIAMPSYSEAAWAYEYLRTLSIEKRCF
VDKSSTADETDTLLSKFFESGDAILCTSLRGTITEGVDFDGEKLHTCLSVGVPLAPPSSE
MDAVEIAYQRAITETGGQEAARLIPSTRRVRQSVGRVIRGVNETGVRILADERYGTSDST
NLRRYLSPQQQREFTPVEYTDLGGAITRFWQYHK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacaggactcatccacagatcaatgtccacgttcacgttcacttgaggagtta
ccagtaacggatgctggtcaacccactgagtcgacaacgcgtcaaacaatgtgtacggat
actgtatcggatattgatgcagggtggacaccatactttcgatatgacacaatctatgcg
gatcaacgcgctgcaattgagtcatttttagatactcttggagagcagggctattatctg
aaagagggtgcatgtggaactggcaagacactcgctgcgataacagcgagcattcatgca
atccgaaatcctaagcaattgaacgatcggtcaccgacaaatgcatccgctccagagtat
gatcgagtaatagctgtcacgccggtcaagaaacagcttcaacaatttattgccgaatta
cgtggcataaatgcaacacttccagcggagacggacccgatacagacggtcgtcttgcga
ggacaagctgatatgatggcgatcaggaacgcagagctcccaaaaacagacactcaagaa
gcaacccaggatcttcgtgccactacgagagaggtcattcgattcaatagtgatattcca
cttgactggccagataatcttagccccccagcgtactcaatggctgagtatgattggtca
accccgagtgagggggcggtacaggcgcaagaaaatcatcagtatgatccaaacagagcg
gaggctatcagacatattgttgcacaattagagccgcgagatacagaaagtaacgcacaa
ttgtgtattgatggtattgagaccccgtatccacagcatgtcccgcatacctcagaaatt
gtcgattcaactcggcttgactcgaattataatcaattaccatcggatctacaaggtcga
tttgacccattctatgcggcgacactcgcaggattacaggaatcaatcgttgagtttgcg
gatgctccatctcatgttatcgataaacaaacactgtttgaggcaacggtcgcgagtgga
tgctgtcctcatgaattaatgtgcattcttgcacagcaggcagatgttattatcgggaat
tataatcacctgcttgatcccgaaactcggtatttgactgatagaaaactagggttgctt
aatgagcgaacaattgcaattatcgatgaagcacatcaacttgaggagcgtagtcgagat
aatctttccacgtcagttgatctgtataccctcatgaaagctcgtaacgatgttagaatt
gcccgtcaatatgcgagtggcagcattgttgacagcccgactccaaatcttcctcgtgag
gatgcggaactagcgcagaaaattgtcgaagacggagcaaagttgagaacgagcgggatt
gaggttgaggaattgcgagctgtagagaaactattgaatattgcaaagcagagactcatc
gacgcaagcgaaacaattgatgcagtaggtctgatacatcgattcgggcaagaggattcg
gaagcacaaagccgggaaataaaatcactggttgatccgaataatcttaattggggagat
cagttgacaagagatctcgagagagacgaatccatctcaatgtcggtaatgcaaggcgcg
gagcgaatcatgagccgattagaaaaggtatttactgcattcaccgagcacgggattctc
aaccgaacaccacagggtcaagaggtaggggcgttcttccgacagtgggcacaggctccg
catgcggtatatcatccggaagttcgcgttattccatcacaaaaggagtcatttccagac
cagttcccagcgtgggtcgaacactggacgccggagttgcgattatttaattgtattcca
aagcgcgaattgcgaagagtgttctctgaacttgggagcgggatattgatgagtgcaact
cttcgcccaaaggagccatttcgtgaatcgattggtattgatgccgtgccacaacttggt
gaattagacacaaaggtgcaatctacggaagatgaaatgacactttggatgaatgggatt
acagatgaaatgactgaggatgtcgaaacccgaccaacgacattcgaccgatttccgctt
cgcttctcgccgaagaatcgactgtctgtcgtggtcgacctcccgaaattcacgaaagcc
aatcgtggtgagcgagagactaatcatcaggcaatgaccgatattcgcgagcagtatgcc
gaggtgatcgcacaagtagcacggacggagggtaatatcctcattgcaatgccgagttac
agcgaggctgcatgggcatatgaatatcttagaacattgtcaatcgaaaagcgctgtttt
gttgataaatccagtacagctgacgagaccgacacgttgttatctaagttcttcgagtca
ggagatgcgattctttgcaccagcctccgtggtacaatcacagaaggtgttgattttgac
ggtgaaaagcttcatacatgtctatcagtcggagtgccactggctccgccaagttcagag
atggatgcagttgagattgcatatcagcgagcaatcactgaaacaggtggtcaggaggcg
gctcggctaattccatcaacacggagggttcgacagtctgtggggcgtgtgatccgtggt
gtgaatgagactggtgttcgtattctggcggatgagcggtatgggacgagtgacagcacg
aatctccgtaggtatctctcaccacagcaacagcgagaattcacaccggtcgaatatacc
gacctgggaggtgcaatcacacgattctggcagtatcacaaatag
DBGET
integrated database retrieval system
