Hymenobacter yonginensis: O9Z63_14150
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Entry
O9Z63_14150 CDS
T08743
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O9Z63_14150 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyk03021
]
O9Z63_14150 (rpoB)
03400 DNA repair and recombination proteins [BR:
hyk03400
]
O9Z63_14150 (rpoB)
Enzymes [BR:
hyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O9Z63_14150 (rpoB)
Transcription machinery [BR:
hyk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O9Z63_14150 (rpoB)
DNA repair and recombination proteins [BR:
hyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O9Z63_14150 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
YtxH
Motif
Other DBs
NCBI-ProteinID:
WBO86649
UniProt:
A0ABY7PUV4
LinkDB
All DBs
Position
complement(3283267..3287142)
Genome browser
AA seq
1291 aa
AA seq
DB search
MQKLQAADERINFAKIKKVIEYPDFLDVQVRSFMDFFQLETAAENRTDEGLFKVFAENFP
ISDSRENFVLTFLDYHVDPPKYSVDECIDRGLTYSVPLKAKLRLVCNDSDNEDFETIEQE
VFLGNIPYMTEKGSFVINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWI
EFATDVNNVMYAYIDRKKKFPVTTLLRAIGYGTDKDILDLFGLSEEVKADKKNLKKAVGR
KLAARVLRTWTEDFVDEDTGEVVSIDRNEVLLERDSTIEEEDIDTILNAGAKSVILHREN
VNIADYAIIYNTLQKDNSNSEKEAVEQIYRQLRNTEAPDEETARDIIQKLFFSDKRYDLG
DVGRYRINKKLGIDTGWDARVLTNEDIVLIVKYLIGLINSKAIVDDIDHLSNRRVRTVGE
QLYAQFGVGLARMARTIKERMNVRDNEDFKPVDLINARTLSSVINSFFGTNQLSQFMDQT
NPLAEVTHKRRVSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVH
ARVNSMGFIETPYRTVENGKVDTTEHVKYLTAEEEDTHHIAQANARIDDEGNFINDLVKG
RFEGDFPVVGPDEYSYMDVAPNQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLKAE
APIVGTGLEGRVATDSRTLVVAEGNGVIDYVDANRIVVKYDLTEDDILVSFDAEKISYDL
IKFRRTNQDTCINLTPLVKNGERVVKGQVLCEGYGTNKGELALGRNMQVAFMPWQGYNFE
DAIVISEKVVRDDIFTSIHIEEFELEVRETKRGEEELTSEIPNVSEEAVRNLDDNGIIRL
GAEVREGDILIGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASLKAPPSLQGVVIGTKL
FSRPKKDKNLRAKSKKEVEELKDSYAKELRGIKSIMIEKLIQLLEGKTSQGIKHKFGDEI
LTKGVKFGKKNITEALFPEKNPYKDESNYAVPEEVNMFKDLVLEGWTADARVNTMVAQLV
KNYAKKRNTITARFKRDRFTLEVGDELPAGIVQLAKVYIAKKRKLKVGDKMAGRHGNKGV
VARIVRDEDMPFLPDGTPMDIVLNPLGVPSRMNIGQIYETVLGWAGLKLGRTYATPIFDG
ATEEEVSKELTEAGLPTFGRAYLHDGLTGQRFDQPVTVGVIYMLKLGHLVDDKMHARSIG
PYSLITQQPLGGKAQFGGQRFGEMEVWALEAFGASNVLQEILTVKSDDVVGRAKAYEAIV
KGDVLPKPNIPESFNVLIHELRGLALEITLD
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
ctgcaaaagctgcaagctgctgacgagcggatcaacttcgccaagattaaaaaggttatt
gagtatccggatttcctggacgtgcaggttcgctcgttcatggatttcttccagttggaa
acggctgccgagaaccgtaccgatgagggtctgttcaaagtattcgccgaaaactttccg
atttcggactcgcgcgaaaacttcgtgctgaccttcctcgattaccacgttgacccgccc
aagtactcggttgacgagtgcattgaccgcggcctcacgtactcggttccgctgaaagcc
aagttgcgcttggtctgcaatgactcggacaacgaggatttcgaaacgattgagcaggaa
gtgttcctagggaacattccctacatgaccgaaaagggctcgttcgttatcaacggcgct
gagcgcgttatcgtatcgcagctgcaccgttcgccgggcgtattcttcgctcagagcaag
cacacgaacggtaccaagctgtactcggcccggatcatcccgtttaaaggctcgtggatt
gagtttgccacggacgtgaacaacgtgatgtacgcgtacatcgaccggaagaagaaattc
ccggttacgacgctgctgcgcgccatcggctacggcaccgacaaagacattctcgacctg
ttcgggctgtcggaggaagtgaaggccgataaaaagaatctcaagaaagccgtcggccgc
aagcttgccgcccgggtgctccgcacctggacggaagacttcgtggacgaggacaccggg
gaggtggtttccatcgaccggaacgaggtactgttggagcgcgactctactatcgaggag
gaggacattgacacgatcctgaacgccggggccaagtcggtgattctgcaccgcgagaac
gtaaacattgccgactacgcaatcatttacaacacgctgcagaaggacaactccaactcg
gagaaagaagccgtggagcaaatctatcgtcagctccggaacacggaggctcccgacgaa
gagacggcccgcgacatcatccaaaagctattcttctcggataagcgctacgacctcggg
gacgtaggccgctaccgtatcaataagaaactgggtattgacactggttgggacgcccgc
gtactgaccaatgaggacatcgtcctcatcgtgaaatacctgatcggtctgatcaactcg
aaggccattgtcgatgacattgaccacttgagcaaccgccgcgtgcgcaccgtgggcgag
cagctctatgcccagttcggcgtgggcctggcccgcatggcgcgtaccatcaaggagcgc
atgaacgtgcgtgacaacgaggacttcaagccggttgatctgatcaacgcccggacgctg
tcgtcggttatcaactcgttcttcggcaccaaccagctgtcgcagttcatggaccagacc
aacccactggccgaggtgacgcacaagcgtcgcgtatcggcactggggccgggaggtctg
tcgcgcgagcgggctggcttcgaagtacgtgacgttcactacacgcactacggccgcctc
tgcaccatcgaaacgccagaaggcccgaacatcggtctgatttcgtcgctgtgtgtgcac
gcccgggttaactcgatgggcttcatcgagacgccttaccgtacggtagagaacggcaag
gtggatactaccgagcacgtgaagtacctgaccgctgaggaagaagacacccaccacatc
gcgcaggccaacgcccggatcgacgacgaaggcaacttcatcaacgacttggtaaaaggc
cgtttcgagggtgacttccccgtggttggtccggacgagtacagctacatggacgtagcc
ccgaaccagattgtatcggtagctgcttcactgattccgttcctggagcacgacgatgct
aaccgggcactgatgggctcgaacatgcagcgccaggcagttccgctgctgaaagccgag
gctccgattgtgggcaccggtctggaaggccgcgtagctaccgactcgcgcacgctggta
gtagctgaaggcaacggcgtaatcgactacgtagatgccaaccgcatcgtcgtgaaatac
gacctgacggaagacgacatcctcgtgagcttcgacgctgagaagatttcctacgacctg
atcaaattccgtcgtaccaaccaggacacctgcatcaacctgacgccgctcgtgaagaac
ggtgagcgggtggtgaaaggccaggtgctgtgcgaaggctacggcaccaacaaaggtgag
ctggctctgggcaggaacatgcaggtggcgttcatgccgtggcagggctacaacttcgag
gatgctattgtcatctcggagaaagtagtgcgcgacgacatcttcacctcgattcacatt
gaggagtttgagctggaagtgcgcgaaaccaagcgcggcgaagaagagctgacctcggag
attccgaacgtaagcgaagaagccgtgcgcaacctcgacgacaacggtatcatccgtctg
ggcgctgaggtgcgggaaggcgacatcctgatcggtaagattacgccaaagggcgaaacc
gacccgactccggaagagaagctgctccgcgccatcttcggcgacaaagccggcgacgtg
aaggatgcctcccttaaggcgccaccgtccctgcagggtgtggttatcggtactaagctg
ttctcgcgtccgaaaaaagacaaaaacctgcgggccaagtcgaagaaggaagtggaagag
ctgaaggactcgtacgccaaggagctccgcggcatcaagtccattatgattgagaagctg
attcagctcctggaaggcaaaacctcccagggtatcaagcataagttcggcgacgaaatc
ctgaccaagggtgtgaaattcgggaagaagaacatcacggaagcgctgttccccgagaag
aacccctataaggacgagagcaactacgccgtgcccgaggaggtgaacatgttcaaagac
ctcgtgctggaaggctggactgccgatgcccgtgtgaacaccatggtagcgcagctggtg
aaaaactacgccaagaagcgcaacaccatcacggcccgcttcaagcgtgaccggtttacg
ctggaggttggcgacgagctgcccgccggtatcgtacagctggccaaagtgtacatcgcc
aagaagcgcaagctgaaggtgggtgacaagatggctggtcgtcacggtaacaaaggggta
gtagcccgcatcgtgcgcgatgaggacatgcctttcctgcccgacggcactccgatggac
atcgtgctcaacccgctgggtgtaccaagccggatgaacatcggtcagatttacgagacg
gtactgggctgggccggcctgaagctgggccgcacctacgctaccccgattttcgacggt
gctaccgaagaggaagtatcgaaggaactgacggaagccgggctgccgaccttcggccgc
gcgtacctgcacgacggcctcaccggccagcgtttcgaccagccggtaacagtgggtgtt
atctacatgctgaaactgggtcacctggtggatgacaagatgcacgcccgttctatcgga
ccgtactcgctcatcacgcagcagccgctgggtggtaaagcccagttcggtggtcagcgc
ttcggtgagatggaagtgtgggcactggaggccttcggtgcttccaacgtgctgcaggaa
atcctcaccgtgaagtcggatgacgtggtaggccgcgccaaagcgtacgaagccattgta
aaaggcgacgtgctgcccaagccgaatatccctgagtcgttcaacgtactcatccatgag
ctacgtggtctggccctggaaatcacgcttgactaa
DBGET
integrated database retrieval system
