KEGG   Hymenobacter psoromatis: A0257_05555
Entry
A0257_05555       CDS       T04376                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hyp  Hymenobacter psoromatis
Pathway
hyp02024  Quorum sensing
hyp03060  Protein export
hyp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    A0257_05555
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A0257_05555
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A0257_05555
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hyp02044]
    A0257_05555
Enzymes [BR:hyp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     A0257_05555
Secretion system [BR:hyp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   A0257_05555
  Eukaryotic Sec-SRP protein
   A0257_05555
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_16 CbiA Zeta_toxin KTI12 nSTAND3 AAA_30 SRPRB cobW AAA_17 APS_kinase ParA ATPase KAP_NTPase AAA_31 ATP_bind_1 ABC_tran AAA_33 AAA_18 PIF1 NTPase_1 NACHT AAA_5 AAA_24 NPHP3_N AAA_14 ArsA_ATPase MMR_HSR1 DO-GTPase1 AAA Pox_A32 TsaE
Other DBs
NCBI-ProteinID: AMR26623
LinkDB
Position
complement(1307867..1309237)
AA seq 456 aa
MFDNLSTKLDKAIKTLKGQGSISEINVAATVKEIRRALVDADVNYKVAKEVTDKIKDEAM
GRDVLTAISPGQLMVKIVYDELTQLMGGEKQDIVIKGDPAVVLLSGLQGSGKTTFAGKLA
SFIKKQNRTVLLVACDVYRPAAIDQLKVLGEQIGVEVYSEPDNKNPVEISQNAIAYAKQN
NKKVVIVDTAGRLAVDEQMMREIEAVKRAINPSETLFVVDSMTGQDAVNTAKTFNDRLNF
DGVVLTKLDGDSRGGAALSIRAVVEKPIKFISTGEKMEALDLFYPDRMAQRILGMGDVIS
LVERAQQQFDEEEAKRINAKIRKNQFDFNDFLGQLEQIKKMGNLKDLVGMIPGASKMMKD
VEIDDDAFKPVESIIKSMTKQERAQPDLINGSRRRRLAAGSGTDIQQVNALMKQFEDMRK
MMRQMNKMSQTKGGMAQMAKMMGGMKGGGMPGMGRR
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtttgacaatctctccaccaagcttgataaggctatcaagaccctcaaagggcagggt
agcatctcggaaatcaacgtcgccgccaccgtcaaagaaattcgccgggcgctggtcgat
gccgacgttaactacaaggttgccaaagaagtaaccgataagattaaggacgaggcaatg
ggccgcgacgtgctcacggccatctcccctggccagctcatggtcaaaatcgtctatgac
gagctgacccagctcatgggcggcgaaaagcaggatatcgtcatcaagggcgacccggcc
gtggtgctgctctcgggcctgcaaggctcgggcaaaacgactttcgccggcaagctcgcc
agctttatcaaaaagcaaaaccgcaccgtgctgctggtggcctgcgacgtgtaccgcccc
gccgccatcgaccagctcaaggtgctcggtgagcaaattggggtcgaagtgtactcggag
ccggacaacaaaaatccggtcgaaatttcgcaaaatgccatcgcctacgcgaagcaaaac
aacaagaaagtcgtcatcgtggacaccgccggccgcctggcggtggatgagcagatgatg
cgcgaaatcgaggctgtcaagcgcgccatcaaccccagcgaaacactgttcgtggtggat
tcgatgaccggccaggacgccgtgaacaccgccaagaccttcaacgaccgcctcaatttc
gacggggtagtgctcaccaagctcgacggcgacagccgcggcggcgcggccctctcgatt
cgcgcggtggtcgaaaagcccatcaaattcatctcgacgggcgaaaaaatggaggccctc
gacctcttctaccctgaccgcatggcccagcgcatcctgggcatgggcgacgtgatttca
ctcgtagagcgcgcccagcagcagttcgacgaggaagaagccaagcgcatcaacgccaag
attcgcaaaaaccagttcgacttcaacgactttctcggccagctcgagcaaatcaagaag
atgggcaacctcaaggacctggtgggcatgattccgggtgcctcgaagatgatgaaagac
gtcgaaattgacgacgacgctttcaagccggtcgagagcatcatcaagagcatgaccaag
caggaacgcgcccagcccgacctcatcaacggttcgcgccgccgccgcctcgccgccggc
tccggcaccgatattcagcaggtgaacgccctgatgaagcaatttgaagacatgcgcaaa
atgatgcgccaaatgaataaaatgagccagaccaaaggtggtatggcccaaatggccaaa
atgatgggcggcatgaaaggcggcggaatgcccggcatgggccgccggtaa

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