Hydrogenophaga sp. RAC07: BSY239_182
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Entry
BSY239_182 CDS
T04455
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSY239_182 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyr03021
]
BSY239_182 (rpoA)
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_182 (rpoA)
Enzymes [BR:
hyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSY239_182 (rpoA)
Transcription machinery [BR:
hyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSY239_182 (rpoA)
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSY239_182 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF211
Motif
Other DBs
NCBI-ProteinID:
AOF86096
LinkDB
All DBs
Position
206320..207303
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AA seq
327 aa
AA seq
DB search
MLNNLLKPKTINVEQVSANKAKVTLEPFERGYGHTLGNALRRVLLSSMTGHAPTEVTIAG
VVHEYSSIDGVQEDVVNMLLNLKGVVFKLHNRDEVTLSLRKDGEGLVTAADIQTPHDVEI
VNPGHVIATLSAGAKLDMQIKVEKGRGYVPGSLRRNDDQARSIGRIVLDASFSPVKRVSY
TVESARVEQRTDLDKLVLEIETNGSIGPEEAVRASAKILVEQLAVFAQLEGAELNFEAPA
QRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLDKH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaatctgctgaagcccaaaaccatcaacgtcgagcaagtctcggccaacaaa
gccaaagtcacgcttgagcctttcgagcgcggctacggccacacgctgggcaacgctttg
cgccgggttttgctgtcttccatgaccggccatgcgccgaccgaagtcaccatcgccggt
gttgtgcacgagtactcgtcgatcgacggcgtccaggaagacgtggtcaacatgcttctg
aacctcaagggcgtggtgttcaagctccacaaccgcgatgaagtcacgctgagcctgcgc
aaagacggtgaaggcttggtgaccgctgccgacatccagaccccgcacgatgtcgaaatt
gtgaaccccggccacgtgatcgccacgttgtccgcaggcgccaagctcgacatgcagatc
aaggtcgaaaagggccgtggttatgtgcccggcagcctgcgccgcaacgacgaccaggcc
cgctccatcggtcgcatcgtgctggacgcgtcgttctcgcccgtcaagcgcgtgagctac
acggtcgagagcgctcgcgtcgagcagcgtaccgatctggacaagctggtgctcgagatc
gagaccaacggctccatcggtcctgaagaagcggttcgcgcttcggccaagatcctggtc
gagcagctggctgtgttcgctcagctggaaggcgccgaactcaacttcgaagcccctgcg
cagcgcagctcgcagcagttcgacccgatcctgttgcgccctgttgatgagctcgaactc
accgtgcgttcggccaactgcctcaaggcagagaacatctattacatcggtgatctgatc
cagcgcaccgagaacgagttgctcaagacccccaacctgggtcgcaagtcgctcaacgaa
atcaaggaagtgctcgcttcgcgcggcttgaccttgggcatgaagcttgagaactggcca
ccggccggtttggacaagcactga
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