Ignisphaera aggregans: Igag_1286
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Entry
Igag_1286 CDS
T01307
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
iag
Ignisphaera aggregans
Pathway
iag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iag00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Igag_1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iag03019
]
Igag_1286
03012 Translation factors [BR:
iag03012
]
Igag_1286
Messenger RNA biogenesis [BR:
iag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Igag_1286
Translation factors [BR:
iag03012
]
Eukaryotic type
Release factors
Igag_1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
baeRF_family10
eRF1_1
acVLRF1
SpoU_sub_bind
Clr5
3-dmu-9_3-mt
Motif
Other DBs
NCBI-ProteinID:
ADM28090
UniProt:
E0SPN4
LinkDB
All DBs
Position
complement(1209276..1210331)
Genome browser
AA seq
351 aa
AA seq
DB search
MKKWKAHATTLLSLYIPPGRPISDVVSLLRQELAITENIKLKRTRDAVQWALTAAIDRLS
KIRENPKNGLVVFAGINDDTGENIAIVFSPPDPVPVYFYRTDKEFHTEFLVPMVEESDVY
GIIIIERDEATIGILKPSGIVVLDEIEWYIPGKHHKGGQSQRRFDRIIEQMVEEFYKHVA
EKVNSYFVPLIEEGKLKGVIVAGPGYAKQDFLKEADNLDYRIRKLIISETIDVAYQGIVG
LKEVVIKAKDILVKQRFVESMEAIEEFKYHIAKDDGYAVYGLKDIEELLNNGAIEKILIC
EDHPDFDRLEKIAMERGAKMIIIPESLDEYQWFKDTFGCIAAISRYAIHQS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagtggaaagctcatgcaactacattgctcagtttatatatacctccaggaaga
ccaataagcgatgttgttagtctacttaggcaggagctagctattacagagaatatcaag
cttaagaggacaagggatgctgttcagtgggctttaacagcagctatagatagattatcg
aagatacgtgaaaatcccaagaatggattagtggtgtttgcagggatcaatgatgataca
ggggagaatatagctatagtgttttcaccaccagatcctgtacctgtatacttctataga
actgataaggaattccatacagaatttctagttcctatggttgaggaatcagatgtctat
ggcataataattatagagagagatgaagcaacaataggtattttaaaaccttcaggaata
gttgttctagatgagatagaatggtatatacctggaaaacatcataagggaggacaaagt
cagaggaggtttgatagaataatagagcagatggtcgaggaattctataaacatgtagct
gaaaaggttaatagctatttcgttccattgatagaagaaggaaagctaaagggagtaata
gttgctggtcctggatatgcaaaacaggatttccttaaagaggcagataatcttgattat
agaatcagaaaactcatcataagtgagactatagatgttgcttaccaaggtattgtagga
cttaaggaagttgtaattaaggcaaaggacattttagttaaacagagatttgttgagtct
atggaggctatagaagaatttaagtatcatattgctaaggatgatggatatgcagtatat
ggcttaaaggatatagaggaattactcaataatggcgcaattgaaaagatattaatatgt
gaggatcatcctgatttcgatagattagagaaaatagctatggagaggggtgcaaaaatg
atcatcattcctgaatctttagatgaatatcagtggtttaaagatacatttggatgtata
gctgctatctctagatatgctattcatcagagctag
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