Ignavibacterium album: IALB_1443
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Entry
IALB_1443 CDS
T01943
Name
(GenBank) Putative hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ial
Ignavibacterium album
Pathway
ial03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ial00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IALB_1443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ial03019
]
IALB_1443
Messenger RNA biogenesis [BR:
ial03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IALB_1443
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
Las1
Chordopox_G3
KH_NusA_2nd
CaM-KIIN
Motif
Other DBs
NCBI-ProteinID:
AFH49153
UniProt:
I0AJJ6
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Position
1654910..1656472
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AA seq
520 aa
AA seq
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MDLIILIPMIAILLALFFYLGWWFNSKTGKKSIVSAEARAEQIIQDAQKEANNIKREKLL
EVKDEWYKKKVEFDNEVNQKKQKLANLEKQLLAREENSEKRYDLIIQKEREVRKLEKELS
DLKLSLDKRSEEIKKLEAEQNERLEKISGLTSDEAKKILINNMIDEAKADAAQIIKEIYD
KAKADAKKEAQKIIVQAIQRTAADHSIESTVSVVQIQNDEMKGRIIGKEGRNIRAFEAVT
GVDVIVDDTPEAVILSSFDQFRREIARVSLERLIADGRIHPARIEEVVQKTTQELEEEIL
REGENTLMQLGLHNMHPELVKHIGKMKYRSSYGQNLLQHSIEVAYLTGIMAAELGLDPVL
AKRAGLLHDVGKTVDKSIEGPHALIGYDLTKKYKEHPIVVNAVGSHHEDIEMEHPIAALV
QSADAISGARPGARREPLESYVKRLENLETLARSFEGVAKTYAIQAGREIRVVVENDKVD
DVVADRLAREIAQKIEEEMEYPGQIKVTVIREVRKIAIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacctgattatactgattcctatgattgcaattctgctcgctttgttcttctatctc
ggctggtggtttaattctaaaaccggaaaaaaaagtatcgtgtctgccgaagcaagagct
gaacaaatcattcaggatgctcaaaaagaagctaataatatcaaaagagaaaaactcctt
gaagtaaaagatgagtggtacaaaaagaaagttgaatttgataatgaagtaaatcagaaa
aaacaaaagttagctaatctcgaaaaacaactcttagcccgcgaagaaaacagcgaaaaa
agatatgaccttattattcagaaagagcgtgaagtcagaaaacttgaaaaagaactttct
gatctgaaactttctctcgataagcgttccgaagaaattaaaaagctcgaagcagaacag
aacgagagacttgaaaaaatttcaggtcttacttctgatgaggcaaaaaagattctcata
aataatatgattgatgaagcaaaagctgatgccgcacagattatcaaagagatttatgat
aaagcaaaagctgatgctaaaaaagaagcccagaaaattattgttcaggcaattcagaga
actgcagccgatcattcaattgaatctactgtttctgttgttcagattcagaatgatgaa
atgaaaggaagaataatcggaaaggaaggaagaaacattcgtgctttcgaagctgttact
ggtgttgatgtaattgttgatgatacacctgaagcagttattctttcttcattcgatcaa
ttcagaagagaaattgcaagagtttctcttgaaagattaattgcagacggaagaattcat
cctgcaagaattgaagaagtggttcagaaaacaactcaggaacttgaagaagaaattttg
cgtgaaggtgaaaacactctaatgcagcttggactgcataatatgcatcctgagttggtt
aaacatatcggtaaaatgaaatatcgttcaagctacggacagaatctgcttcagcacagc
attgaagtagcttatctgaccggaataatggctgctgaactaggactcgatcctgttctt
gcaaaaagagcaggtttacttcacgatgttggtaaaacagttgacaaaagtattgaaggt
ccgcacgcacttattggatatgatcttactaaaaaatataaagagcatccgattgttgtt
aatgctgttggctctcaccacgaagatattgaaatggaacatcctattgctgctttagtt
cagtctgcggatgcaataagcggtgctcgtccgggtgcaagaagagaacctcttgaaagt
tatgtcaaaagattagaaaatcttgaaactctcgcgcgttcttttgaaggagttgcaaag
acttatgcaattcaggccggaagagaaattcgtgtggttgttgagaatgataaagttgat
gatgtggttgctgacagacttgcccgcgaaatcgcacagaagattgaggaggaaatggaa
tatcccggacaaattaaagttaccgtaatcagagaagttagaaaaattgcaattgctaag
taa
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