Intestinibacter bartlettii: NQ514_04850
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Entry
NQ514_04850 CDS
T08452
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ514_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibr03019
]
NQ514_04850
03009 Ribosome biogenesis [BR:
ibr03009
]
NQ514_04850
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ514_04850
Messenger RNA biogenesis [BR:
ibr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ514_04850
Ribosome biogenesis [BR:
ibr03009
]
Prokaryotic type
rRNA helicases
NQ514_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
NAT10_TcmA_helicase
AAA_19
Vp20_capsid
Motif
Other DBs
NCBI-ProteinID:
UWO81819
LinkDB
All DBs
Position
995192..996634
Genome browser
AA seq
480 aa
AA seq
DB search
MNSFNNFNLDTEILKSLDILDYKIPSQVQSRVIPVLLDKKDILVKSKTGTGKSAAFAIPI
CNKIKKLENKLKVLVIVPTRELALQVKEEIEKIGRLKMIKCSVILGKEPLKNQILELKQG
TNVIVATPGRMIDHISRGSVDLDDLDYFIIDEVDKMFTKGFETDINTIMKNIPNTSCKAF
FSATVDNDLKEICNGYMKDYEYIEVDEEEILKNQIEEKYIKVEKQELKYDALKNVLYKFK
PETTIIFTNTKKQAEVLYENMKSEGFLVEQIHGDISQERRFYIIDSFKKHEFNILISSDI
ISRGIHIDDVSLVINYDIPSDSEIYVHRIGRTGRAGKHGKAISLVSNNECRDFENIEVYT
KNKIEPIGIEYCEKDKIEYQKTIKELLNKYALVENQEQDEFKGEVVKIHISIGKKKKIRI
GDIVGALSNIDSLENSDLGVIKIYDNYSTVDILNQKGKKFLNDYKEIIVKNKKAKIREEK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttttaataattttaatttagatacagaaatattaaagtcattagatatttta
gattataaaattccatcacaagtacaaagtagggtaattcctgttttattagataaaaaa
gatatattggttaaatcaaaaactggtacagggaaaagtgcagcattcgcaatacctata
tgtaataagataaaaaaattagaaaataagttaaaggtattagtaattgtgccgacaaga
gagttagcattacaagttaaagaagaaatcgaaaaaataggtagacttaaaatgataaaa
tgtagtgttattttaggaaaggaacctcttaaaaaccaaatactagaattaaagcaaggc
acaaatgtaatagtagcaactcctggaagaatgatagatcacatttctagaggaagtgta
gatttagatgatttagattattttataatagatgaagtagataaaatgttcacaaaggga
tttgaaactgatattaatacaattatgaaaaatattcctaatacatcatgcaaagcgttt
ttctcagcaacagtagataatgatttaaaagaaatatgtaatggatacatgaaggattat
gagtatattgaagtagatgaagaagagatattaaaaaatcaaatagaagaaaagtatata
aaagtagaaaaacaagaattaaaatacgatgctctaaaaaatgttttatataaatttaag
ccagaaacaactattatttttacaaatacaaaaaaacaagcagaagtattatatgaaaat
atgaaatcagaaggatttttagtagagcagattcacggagatatttctcaagaaagaaga
ttttatataatagatagctttaaaaaacatgagtttaatatattaataagtagcgatatt
atttctagaggaattcatatagatgatgtatctttagttataaattacgatataccttct
gatagcgagatatacgtccatagaattggaagaacgggaagagcaggcaaacacgggaaa
gcaattagcttagtatcaaataatgaatgtagagattttgaaaatattgaggtctataca
aaaaataagatagaaccaataggtatagaatattgtgaaaaagataaaattgaatatcaa
aaaacaataaaagaattgcttaataaatatgctttagtagaaaatcaagaacaagatgaa
tttaaaggtgaagttgtaaaaatacatataagtatcggtaaaaagaaaaaaataaggata
ggggatatagttggggcacttagtaatatagatagtttagaaaatagcgatttaggtgtt
ataaaaatatatgataattattctactgtggatatattaaatcaaaaaggaaagaagttt
ttaaatgattacaaagaaattatagttaaaaataaaaaggcaaagataagggaagaaaaa
taa
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