Intestinibacter bartlettii: NQ514_05045
Help
Entry
NQ514_05045 CDS
T08452
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ514_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibr03019
]
NQ514_05045
03009 Ribosome biogenesis [BR:
ibr03009
]
NQ514_05045
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ514_05045
Messenger RNA biogenesis [BR:
ibr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ514_05045
Ribosome biogenesis [BR:
ibr03009
]
Prokaryotic type
rRNA helicases
NQ514_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Surface-like_ins_dom
Cas3-like_C_2
Flavi_DEAD
Dark_CARD
Motif
Other DBs
NCBI-ProteinID:
UWO81855
LinkDB
All DBs
Position
complement(1042245..1043360)
Genome browser
AA seq
371 aa
AA seq
DB search
MNFKDLKISDELIDTLKKNGIKTPTPIQEESILHIKNNKDILAQSQTGTGKTLAFLIPIF
DSISPKNQNIQTLILAPTRELAIQIYNEAEKLNKDKNINVLAAYGGKDIKSQLNKLKRNI
QLVIATPGRLLDHLDRKSIDLSKLNTLVLDEADQMILMGFKNEIEAIIKETNKKRQTLCF
SATLDSQVKKLAYRYMKDPVEVTIKSKEITLETIKQEVVETTDRHKQEALCKVLDEDNPF
MAIIFCRTKRRVDALDEALAVKGYNCEKLHSDIPQAKRERIIKSFRKADLQYLIATDVAS
RGLDITGITHIYNYDIPETSEDYIHRIGRTGRIGNDGYTCMFVDPKNTKTLEKIESDIKY
EIPRRLVELDK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagatttaaaaataagcgatgaattaatagatacacttaagaaaaatggt
ataaaaacaccaacccctattcaagaagaaagtatacttcatataaaaaataataaagat
atactggctcagtctcaaactggtactggaaagactctagctttcttaatacctatattt
gattctatatcacctaaaaatcaaaatatacagactcttatactagctcctacaagagaa
cttgctatacaaatatataatgaagcagaaaaactaaacaaagataaaaatataaatgta
ttagctgcttatggtggaaaagatataaaatcacaacttaataaattaaaaagaaatata
caattagttatagcaactcctggtcgtctgttagaccacttagacagaaaatcaatcgac
ttaagcaaattaaatactcttgtacttgatgaagctgaccaaatgatacttatggggttc
aaaaatgaaattgaagctattataaaagagactaataaaaaacgtcaaacactttgtttc
tctgcaacacttgattcacaagttaagaaactagcttatagatatatgaaggatccagtt
gaagtaactataaaatctaaagaaataactttagaaactattaaacaggaagttgtagaa
actactgatagacataaacaagaagctttatgtaaagttttagacgaagataatccattt
atggcaattatattctgtagaacaaaaaggagagttgatgcgttagacgaagcattagca
gtaaaaggatataactgtgaaaaactacatagtgatattcctcaagcaaaacgtgaaaga
attataaaatcatttagaaaagctgatttacaatatttaattgctacagatgttgcatct
agaggacttgatataacaggaattacacatatatataactatgatattccagaaacaagt
gaagattatattcacagaataggtagaactggtagaataggaaatgacggatatacttgt
atgtttgtagaccctaaaaacactaaaacacttgaaaaaattgaaagtgatataaaatac
gaaattccaagaagattagttgaattagataagtaa
DBGET
integrated database retrieval system
