Intrasporangium calvum: Intca_0460
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Entry
Intca_0460 CDS
T01385
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ica03021
]
Intca_0460
Transcription machinery [BR:
ica03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Intca_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_23
HTH_38
Sigma70_ECF
GerE
KORA
MarR_2
DUF6381
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
ADU47008
UniProt:
E6S8N9
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All DBs
Position
502378..503226
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AA seq
282 aa
AA seq
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MSRMKSVSPTSTPTPISRRRGRFVERDRKAEELLLELSRTTNCAERERLTDEIVRLHLDL
CDGVAARYAGRSIPTEDLVQVARLALLVAIKRYQPGPGSSFIGYALPTISGELKRHFRDH
GWMVRPPRRLQELGPVLRLAREHWEQEHGTSPTTQDLAEEVGVDPEQVSECLSAEHSYHP
LSLDLTFGDDESRSLAESLAEPQDELESAADRVSLGTALSSLSQKDRELLQMRFVDGMTQ
KEIGLALGVSQMQVSRLVRAVLDRLRTQMGVTVDDDRSATAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcatgaagtccgtttcccccaccagcacgcccaccccgatcagccgccgtcgc
ggccgattcgtcgagagggaccggaaggcggaggagctgctcctcgagctctcgcgtaca
acgaactgcgcggagcgcgaaaggctcaccgacgagatcgtccggctccacctcgacctc
tgtgatggcgtggctgcccgctacgccgggcgcagcatcccgaccgaggacctcgtccag
gtcgcgcggctcgcgctcctcgtcgcgatcaagcggtaccagccgggccccggctcgtcg
ttcatcggctacgccctcccgaccatctcgggcgagctgaagcggcacttccgggaccac
gggtggatggtccgcccgccccggcggctccaggagctcggccctgtcctccgcctcgcc
cgcgagcactgggagcaggagcacggcacctcgccgaccacgcaggacctcgccgaggag
gtcggcgtcgacccggagcaggtctccgagtgcctgtccgcggagcacagctaccacccg
ctgtcgctcgacctcaccttcggagacgacgagtcccgctcccttgcggagagcctcgcc
gagccgcaggacgagctcgagtcggcggcggaccgggtctcgctcgggaccgcgctgagc
agcctgtcgcagaaggaccgtgagctgctccagatgcggttcgtcgacgggatgacgcag
aaggagatcggcctcgcgctcggcgtcagccagatgcaggtctctcgcctcgtccgggcc
gtcctcgacaggctgcgcacccagatgggcgtcacggtcgacgacgaccgcagcgccacc
gccgcctga
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