Candidatus Ishikawaella capsulata: ICMP_487
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Entry
ICMP_487 CDS
T04149
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp00020
Citrate cycle (TCA cycle)
icp00190
Oxidative phosphorylation
icp00650
Butanoate metabolism
icp00720
Other carbon fixation pathways
icp01100
Metabolic pathways
icp01110
Biosynthesis of secondary metabolites
icp01120
Microbial metabolism in diverse environments
icp01200
Carbon metabolism
Module
icp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
icp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
icp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ICMP_487 (sdhA)
00650 Butanoate metabolism
ICMP_487 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
ICMP_487 (sdhA)
00720 Other carbon fixation pathways
ICMP_487 (sdhA)
Enzymes [BR:
icp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
ICMP_487 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
Imm45
NAD_binding_8
Pyr_redox_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAH83338
UniProt:
C5WDD2
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All DBs
Position
complement(555460..557238)
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AA seq
592 aa
AA seq
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MYNLMKLPVREFDVIVIGAGGAGMRTAIELSKSGHTCALISKVFPTRSHTVSAQGGITVA
LGNAHIDNWEWHMYDTVKGSDYLGDQDAIEYMCKNGVNAILEVEHMGLPFSRFDNGLIYQ
RPFGGQSKNFGNEQATRTAAAADRTGHALLHTLYQQNLKNNTTIFSEWYAIDLVKNQDDA
IVGCTTICIETGEIVYFKAKVTVLATGGAGRIYQSTTNAHINTGDGIGMVLRAGLAVQDM
EMWQFHPTGIAGSGILITEGCRGEGGYLLNKHNERFMERYAPKAKDLASRDVVSRAMMIE
ILEGRGCEGPWGPHINLKLSHLGKEVLESRLPGILELSRTFAHVDPVKQNIPVIPTCHYM
MGGIPTKITGQVIRINPNGTEEIILGLFAVGEVACVSVHGANRLGGNSLLDLIVFGRATG
LYLREHITHQDELKEANNDEIEMAMMRFNRWQNNRKGEDPVKIRKALQQCMQNHFSVFRE
GNKMQKGLQELKAIRESLKKARLDDHSLIFNTQLIECLELDNLMETAYATAISAKFRTES
RGAHSRSDYPIRDDKNWLCHSIYLPQIEGMLCREVNMQTISRPPFLPQVRTY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgtataacctaatgaaattaccagttagagaatttgatgtgatagtaataggtgcaggt
ggcgccggtatgcgaacagctatcgaactttctaagtcaggacatacttgtgctttaatt
tcaaaagtatttccaactcgttcacatacggtttctgcacaagggggaattactgttgct
cttggtaatgcacatatagataactgggaatggcatatgtatgatactgttaaaggttct
gattacttaggtgatcaagatgctattgaatatatgtgtaaaaatggagtaaatgcaata
ttagaagtagaacatatgggattacccttctctcgttttgacaatggtttaatttatcaa
cgcccgttcggaggacaatcaaaaaattttggtaatgaacaagccacacgtacagccgca
gcagctgaccgtactggtcatgcactattacatactttatatcagcaaaatttaaagaat
aatactacgattttttctgaatggtatgctatagatttagtaaaaaatcaagatgacgct
attgtgggatgtaccactatttgtattgagaccggtgagatagtatattttaaagcaaag
gtgaccgtgctagctactggtggtgccggacgtatttatcaatctacaaccaatgcgcat
attaatactggtgatggtataggaatggttttacgggcgggattagcagtgcaagatatg
gaaatgtggcagtttcatcctactggaattgctggaagtggtattttgattactgaagga
tgtagaggagaagggggatatttacttaataaacataacgaacgttttatggagagatat
gctccaaaagctaaagatttagccagtagagatgtagtatcaagagctatgatgatagaa
attcttgaaggaagagggtgtgaaggaccatggggtcctcatattaatttaaagctatct
catttaggaaaagaagtattagaatctagattaccaggcattttagaactttctcgcact
tttgcacatgttgatccagttaaacaaaatattcccgttattccgacgtgtcattatatg
atgggtggtattcctactaaaattactggtcaagtaatacgtattaatccaaatggaaca
gaagaaataattcttggattatttgctgtaggagaagtagcatgtgtatctgtgcatgga
gctaatcgtttaggaggtaattctttacttgatctaattgttttcggacgagcaactggt
ttatatctgcgcgaacatatcacacatcaagatgaactaaaagaggctaacaatgatgaa
attgaaatggctatgatgcgttttaatcgttggcaaaataacagaaaaggtgaagatcct
gtaaaaattcgtaaagcattgcagcaatgcatgcaaaatcacttttctgtatttcgggaa
ggtaataagatgcaaaaaggattgcaggaattaaaagcaattcgtgaatccttaaaaaag
gctagattagatgatcattcacttatttttaatacccaactcattgaatgtttagaatta
gataatctcatggaaacagcttatgcgactgctatatcagctaaatttcgtactgaaagc
cggggagcacatagtcgttcggattatccaattcgagatgataaaaactggttatgtcat
agcatttacctgcctcaaatagaaggtatgctgtgtcgtgaagttaatatgcaaacaata
tcacggccaccgtttttacctcaagtacggacttattaa
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