Ictalurus furcatus (blue catfish): 128601564
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Entry
128601564 CDS
T09387
Symbol
lmx1a
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601564 (lmx1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
128601564 (lmx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
TFIIE-A_C
Homeodomain
MRI
CDC45
DUF4611
Motif
Other DBs
NCBI-GeneID:
128601564
NCBI-ProteinID:
XP_053470835
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All DBs
Position
25:139215..148649
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AA seq
263 aa
AA seq
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MGEGNLTTLLEGACRPVCEGCHRLIAERYLLRVHDSLWHERCVKCAACAEPLKSTCFLRD
SKIYCRRDYQQLFSVRCRACAEVISPAELVMRAGDAVFHLHCFCCSVCDCRLQKGDRCVL
VGDKLLCTQHYQHTLTSPTTTDSGRSEDEDDEEDESNVKVAGDRNPTRDGDHKRPKRPRT
ILTTQQRRAFKASFEVSSKPCRKMKKLARRQQQQQKQCQSPQEQNDSQTHTNGMLTLRRT
PVRLGCLNPRTWLKLGDVDGVGH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaggaaatttaacaacgttactggagggtgcgtgcagaccggtgtgtgaaggc
tgccaccggctcattgcagaacgttacctgctgcgtgtgcatgactctctgtggcacgag
cgctgtgtgaagtgcgccgcttgtgccgagccgctgaagagcacctgcttcctgcgagac
tccaaaatctactgcagacgggattaccaacagctgttctcagtgcgctgtagggcttgt
gctgaggttatctccccagcagagctggtgatgcgagcaggtgatgcagttttccacctg
cactgtttctgctgctcagtgtgtgactgccggctgcagaaaggagatcgctgtgtgctg
gtgggggacaagctgctctgtacacaacattaccagcacacgctgaccagtcccaccacc
accgactcaggccgaagtgaggatgaggatgatgaagaggatgaaagcaacgttaaggtg
gcaggagacagaaatcccaccagagacggggaccacaagaggccaaaacggccacgcacc
atcctcaccacgcagcagagacgagcttttaaagcctcgtttgaagtctcatccaaacct
tgcagaaaaatgaagaaattggccagacgacagcagcagcagcagaagcagtgccagtcc
cctcaggagcagaatgacagccaaacacacaccaacggtatgctcacactcaggcgcact
ccagtaaggcttggatgtttaaaccctagaacttggttgaaacttggggatgttgatggg
gtaggacattga
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