Ictalurus furcatus (blue catfish): 128601705
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Entry
128601705 CDS
T09387
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b isoform X1
KO
K04683
transcription factor Dp-1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03083
Polycomb repressive complex
ifu04110
Cell cycle
ifu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128601705 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128601705 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128601705 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601705 (tfdp1b)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128601705 (tfdp1b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
128601705 (tfdp1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128601705 (tfdp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
128601705
NCBI-ProteinID:
XP_053470977
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Position
26:complement(7526198..7548433)
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AA seq
414 aa
AA seq
DB search
MMARDGGLKETSGELKVFTTQNVSPGTGEFPPRNPGVLFVREGAVVSLVTVHPSSVTGVK
QIMPKALGGPGVNVLSHVVIGTPQRPSAPAGAALLTSPRTPSAQFLTPQTQARESSPWSS
GRSSRRGDKNGKGLRHFSMKVCEKVQKKGVTSYNEVADELVTELSSGDNISPNDAHVYDQ
KNIRRRVYDALNVLMAMNIISKDKKEIKWIGFPTNSAQECKDLEAERQRRLERIKQKQSQ
LQELILQQIAFKRLVQRNREAEQKNHRPPPNTVIHLPFIIVNTSKKTVIDCSISNDKFEY
LFNFDNMFEIHDDIEVLKRMGMALGLDSGKCTPENLKIARTLIPKALEPYVTDMAQGVHR
HSHTNSDNGAVATMASSSNSSYHGSSRDTPASFLEDEEEDEDEDDEDFDDDDED
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagagatggtggcctgaaggaaaccagtggagagctgaaggtttttaccact
cagaacgtgagtcctggaacaggtgagttcccacctcggaatccaggtgtgctgttcgtc
agagaaggtgctgtcgtgtctctcgtgactgtccatccttcttctgtcaccggagtgaag
cagataatgcctaaagcactcggaggccctggcgttaatgtgctttcacatgtggtgatt
ggcactcctcagaggcccagtgctcctgctggtgccgctctgttaaccagccccagaact
cctagtgctcagttcctcacgccacagacacaggcgcgagagtcttcaccctggtccagt
ggacgcagcagtagaagaggggacaagaatgggaaaggcttgagacatttctccatgaag
gtgtgcgagaaggttcagaagaaaggcgtaacctcctataatgaggtcgcagacgagctg
gtgactgagctgagttctggagacaacatctctccaaatgacgctcatgtttatgaccag
aagaacattcggcggcgggtatatgatgcactaaatgtcctaatggcgatgaacatcatc
tccaaagacaagaaggaaatcaaatggatcggcttcccaactaattctgctcaggagtgc
aaggacctggaggccgagcgccagcgacgacttgaaagaatcaagcagaagcagtctcag
cttcaagagctcatactacagcaaatagccttcaagcgcctggtgcaaaggaatcgcgag
gcagagcagaagaaccacagacctcctcccaacacagtcatccacctccccttcatcata
gtgaacaccagcaagaagaccgtcatcgactgcagcatctcaaatgacaagtttgagtac
ctgtttaactttgacaacatgtttgagatccatgacgacatcgaggtgctgaagcgcatg
ggcatggcgcttgggctcgactcgggcaaatgtacgccggaaaatctgaagatagcccga
accctcatacctaaagcgctggaaccttatgtaacagatatggcacagggagtccacaga
cattctcatacaaacagtgataatggagctgttgccactatggcctccagctccaacagc
tcgtaccatggcagctctcgtgatactccggcatccttcctggaagacgaggaagaggac
gaagatgaggatgatgaggactttgatgatgatgatgaagattaa
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