Ictalurus furcatus (blue catfish): 128606515
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Entry
128606515 CDS
T09387
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128606515 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128606515 (cngb1a)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128606515 (cngb1a)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128606515
NCBI-ProteinID:
XP_053478665
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All DBs
Position
4:7384698..7418362
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AA seq
1204 aa
AA seq
DB search
MFYIHLEPEPEPPTQVPVVEVVSDAEPEGDKPLTPRVMEWIKHGLEKVVPQPGHSPSITD
TSDKKEPAPNTAPPKAPDLSAAEDATKGTNVEEESNVVSWIAQGLGRIMPQPVLKPKEDT
LDTVQSICILQEDFVQEDNLVLEEKLVLEENLVLEEVDSDWEQQQVEQACLLNAKLEKQA
EVHMEDQICPLQDVLNNTIPDIFITQQEDAETQTERWTPLIENIRREAEEAALVSIQERL
ERERLEAARIAEELARQAAELAVRQLEEEHTVIRVTESERVSEPDSGEQLSNIQEEENED
DPECLVDVCPVEELKTYKTEITAQITQKEESPESPPPKEFTPASQPEIEHTPPREPAVEP
EPDGEDHAIAKTPSPVVSPVITTQPETATSGPSTPAVVQEDEAFQEECGECPHVSVEEVD
DGSIPIVPQIVEPQESDGVSLTVPVPVMATQSKAVLIERAFQPDEQVEEEEKEKEEDLTP
RHGLLTVEEDGSERPLSSASQTSVVVNERLQELIKLFKERTERTKERLIDPDESEEESPS
ATPTKKAAAPPPPPPPPPPPPEEKKDVPADDESDEEQFLEFMGYQVKVPKVPPMPDWLRA
IVEYRFPSSIDPFTDMIYVVWLFFVMCAWNYNVWLIPVRWAFPYQTPENIHLWLLADYLC
DTIYILDIVVFQPRLQFVRGGDIVCDKKDMRENYMKTERFKSSHGISTQLALPVQGLTDI
WMFQMDMISLLPLDVLYYFTGVKSILRFPRILKYMAFFEFNDRLEAVMKKAYIYRVIRTS
AYLLYSLHCNACLFYWGSDYEGLGSTKWVYDGRGNSYIRCYYFAVKTLITIGGLPDPTTV
FEIVFQLVNYFVGVFAFSIMIGQMRDVVGAATAGPAYYRSCVDSTVNYMTAYRIPREVQN
RVKTWYDYTWQSQGMLDEQELLIQLPDKMRLDIAVDVNYTIVSKVALFQGCDRQMIFDML
KRLKSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLA
VGGGNRRTANVVAHGFANLFILDKKDLSEILVHYPESQKILRKKAKKMLTKDTKPEEKGV
GKESGQVIPLRPETPKLFKAALVVGQGETFAKLKDTYKDTGATLQPSSSTAAPVPPPSPI
HRRSPMQRTVTQDDDDDLVTQTTDSTVIIRMIPRQHGEEILSVEMAEEEDGTAEKTDQEE
RKEE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttttatatccatttagagcctgagcctgagcctccaactcaagtccctgtggtggag
gtggtttctgatgcagaacctgaaggagacaagccattaactcccagggtgatggagtgg
ataaagcatggtttggagaaggttgttccacagccaggacactctccatctattacagac
acttcagataaaaaagaacctgctcctaatactgcacctccaaaggcacctgatctatca
gcagctgaggacgcaaccaagggaacaaatgtggaggaggaatccaacgtggttagctgg
attgcgcagggactcggtcgcattatgccacagcctgttctgaagccaaaagaggacact
ttggatacagttcagagcatttgcatcctgcaggaagactttgtgcaggaggacaacctg
gtgctggaggagaaactggtgctggaggagaacctggtgctagaggaggtggactcagac
tgggagcagcagcaggtcgagcaggcttgtttgctcaatgccaagctggagaaacaggct
gaagttcatatggaggatcagatttgccccctgcaggatgtcctaaacaacaccatacct
gatatcttcatcacacagcaggaggatgctgagacacaaacagagcgctggactcctcta
atagagaacattagacgtgaggctgaggaagctgccttggtctccatacaagagaggctg
gagcgtgagcgtctggaggcggcgaggatagcggaggagttggcacgccaggctgctgaa
ttggcagtaagacagctggaggaggaacacactgtaatcagagtcacagagtcagaacgt
gtgtctgaaccagacagtggagagcaactttccaacatccaggaggaagagaatgaagat
gacccagagtgtcttgtggatgtgtgccctgttgaggagcttaaaacatataaaactgag
attacagcgcagatcacacaaaaagaggagtcacctgagtcacctcctccaaaggaattc
actcctgcaagtcaacctgagatagaacacaccccaccacgagagccagctgtcgaacca
gaacctgatggagaagatcatgctatagcaaagaccccttcacctgtagtgtctccagtc
ataaccactcagccagaaacagctacttcgggtccctctactccagctgttgtacaggaa
gatgaggcatttcaagaggaatgtggagaatgtcctcatgtgagtgtagaggaagttgat
gatggatccattcctatcgtacctcaaattgttgaaccccaggagtcggacggtgtcagc
ctcactgttcccgttcctgtgatggccacccagagcaaagcagtgctcattgagagggct
ttccagccagacgaacaggttgaagaggaagaaaaggagaaagaggaagatctgaccccc
cggcatggccttctcactgtggaggaagatggttctgagcgtcctctctcttcggccagt
cagacaagtgttgtggttaacgaacgtctgcaggagctgatcaagctgtttaaggaacga
acagaacgtactaaagagaggctgattgacccagatgagtctgaagaagagagcccctca
gcaacacctaccaaaaaggccgccgcgcctccacctcctccacctcctccacctcctccc
cctgaggagaagaaagatgttcctgctgatgacgagagtgacgaggagcagttcctggag
ttcatgggctaccaagtcaaagtgcccaaggtaccccccatgccagactggctgagagcc
atcgtggagtatcgtttcccttccagcatcgatcctttcactgatatgatctatgtagtg
tggctgttttttgtgatgtgtgcttggaactataacgtgtggctgatcccggtgcgctgg
gcgttcccgtatcaaactccagagaacatccacctgtggctgctagctgactatttatgt
gacaccatctacatcctggacattgtggtctttcagcccaggctacagttcgtccgtggg
ggagatatagtgtgtgataaaaaagatatgagagaaaattacatgaaaacagaacgattt
aagagtagccatggcatttccacacaactagctttgcctgtccagggcttgactgatatc
tggatgtttcagatggacatgatcagtctgttgcccctggatgttctgtactatttcaca
ggcgttaaatccattctgcgcttcccgcgcattttaaagtacatggcattctttgaattt
aacgatcgtctggaggcagtgatgaaaaaagcctacatttacagagtgatccggaccagc
gcgtacttgctctattcactgcattgcaacgcctgtctgttctactggggctctgactat
gaaggccttggctccactaaatgggtctatgatggcagaggcaacagttatatccgttgc
tactactttgctgtaaaaactctgatcactatcggaggtctcccagatcccacgacggtc
tttgaaatcgtctttcagttagtcaattactttgtgggtgtgttcgctttctcgattatg
attggtcagatgagagatgttgtaggagcagctactgcaggtccggcgtactacaggtca
tgtgtggacagcacggtaaattacatgaccgcctatagaataccacgtgaggttcagaac
agagtcaagacctggtatgactatacctggcaatcacaaggcatgttggatgaacaggag
ttgctcatacagctgcctgataagatgcgtctggacattgcagtggatgtgaactacacc
attgtcagcaaagtggccctcttccaaggttgtgacagacagatgatatttgacatgttg
aagagactgaagtctgtggtctacctcccaggagactacgtgtgtaagaagggtgagatc
ggcagggagatgtatatcatcaaagctggagaggtgcaggtggttggaggccctgatggt
aaaactgtgtttgtcactttgagggccggatctgttttcggggaaatcagcttgctggct
gtaggtggagggaataggcgcacagctaatgtggtagcgcacggcttcgctaacctcttc
atcctggataaaaaggacctctctgagatcctggtgcactacccagagtcccagaaaata
ctacgcaagaaggccaagaagatgctaacgaaggatacaaagccagaagagaagggtgtg
ggtaaggaatctggtcaggtgatcccattacgaccagagactcccaaactgtttaaggcc
gccctggtggtgggccaaggagaaacgtttgccaaactgaaagacacctacaaagacact
ggagccacactacagccttccagcagcacagcagcacccgtgccccctccctcacccatt
caccgtcgatcacccatgcagcgcacagtcacacaggacgacgatgatgacctggtgaca
cagaccacggacagcacggtgatcatccgcatgatcccacgccaacacggagaggagatc
ctcagtgttgaaatggcggaggaagaagatggaacagctgagaagactgatcaggaggag
aggaaagaagaatag
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integrated database retrieval system
