Ictalurus furcatus (blue catfish): 128608919
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Entry
128608919 CDS
T09387
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128608919 (scn1laa)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128608919 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Lustrin_cystein
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
128608919
NCBI-ProteinID:
XP_053483086
LinkDB
All DBs
Position
6:21777587..21811076
Genome browser
AA seq
1975 aa
AA seq
DB search
MAQILAPLGPQSFRPFTRESLKAIEKRIKEEKSKKPKKGEQEGNAANEDQPQPNSDLGQG
KKLPFIYGDIPNGMVSTPLEDLDPYYCNQKTFIVLNKGKTISRFNATSALYVLSPFNPIR
RISIKILVHSLFNIIIMCTILANCVFMTFTEDSSRRALFKNIEYTFTAIYTFDSLIKILA
MGFCIGKFTFLRDPFNWLDFTVIVMAYVTEFAKGLGNVSALRSFRVVRALKTISVIPGLK
TIVSALFQSVKRLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIKIPINGSITEKGQLVF
TTNVTEFNRTQYYNDADNYYKMEGRKDPLLCGNNSDAGQCPDGYFCHKAGPNPNYNFTSF
DNFGWAFLSLFRLMTQDYWENLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATLEEALQKEEKFQAMMEQLRRQQAEAQAAVAVFESGKLSGDSSSEASKLSSKS
AKERCNRRKKRKQREEEGEKGDNEKVHNSDPENSITRTSFRYSEDGNILSYDRTYQSPHQ
SLVSIQPSVFSPRRNSRTSIFTFRGRLGSENGFADDEHSPFEDTGSRRGSLFLPHCSERL
YSTGSRNSLTPRVFLSPNGKVCSSVDCNGTVSYVNSLPSSPDVLQLPEVTIEKATTDDKE
YRRRYEAEQLSPGFLNERTSRQRALSVASIITNTMEVLEDSRRKCHPRWYKFAKAFLIWD
CFPAWVKIKRLIHTFVMDPFVDLFITICIVVNTIFMAMEHHTYKDPSNKDPNKDVSDLSV
VLKVGNYVFTGIFTAEMIIKIIALDPYNYFQESWNIFDSVIVTLSIMELGLENVPGMSVL
RSFRLLRVFKLAKSWPTLQMLIKIIHNSVGALSNLTLVLAIIVFIFAVVGMQLFGKSYKA
NKHKISTDGKLRWHMKDFFHSFLIVFRVLCGEWIETMWDCMMVAGQPMCLTVFLMVMVIG
NLVVLNLFLALLLSSFSADNLAATNDDCERNNLQIAIARIRKGVAYSKARLHSFFHSNCF
RRTENKVKEEHGLKDGKKQAEMSTHTTVELIKDPGCEKEAPGADTGSENFIFNSSLSISV
PIATADSDPECHNMDDLSSCSSDMEEDNEKLSDGMSSSEGSTVDLQPLKERRESLDFELE
LPVDDPEACFTQACVNRFPCCNVNVEKGKWKTWWNIRHTSYRIVEHNWFESFIIFMILLS
SAALAFEDIYIEKKKTVKTVLEYADKVFTYIFILEMLLKWLAYGFAKYFTNAWCWLDFLI
VGVSLISLVANAFDISKLTPIKFLRTLRSLRPLRALSRFEGMRVVVNALFGAIPSIVNVL
LVCLIFWLIFSIMGVNLFAGKFYECVNATSGSRLNLSLASNLTECLWFGESARWKNVKIN
FDNVGAGYLALLQVATFKGWMDIMYAAVDHRGVNLQPQFEASLYYYIYFVIFIIFGSFFT
LNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKLQALL
FDIVTNQAFDIFIMVLICLNMLTMVVESEDQSQEARTHLKRINVVFVALFTMECVLKMIT
LRQYFFTNGWNIFDFVVVILSIVGTFVSEVIKYLFSPTLIRVVRLARIGRILRLIKSAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYAIVAMSQFAYVKKEAGIDDMFNFETFGSSML
CLFQITTSAGWDGLLSPILNREPDCDPQKDHPGSNGKGDCGNPAIGIIFFVSYIIICFLI
VVNMYIAVILENFSVATEESAEPLSEDDFDMFYEVWEKFDPDATQFIEYKKLSDFADSID
PPLRIPKPNKIQLINMDLPIVSGERIHCLDILFAFTKRVLGESGDMDGLRGQMENRFMAS
NPSKESYEPITTTLRHKQEDVSAVIIQRAYRMYARKQNVKIAPSTYKEVVQENGMVSNKV
PVTDRFNNHSASDKSDTTSSTIIPPSYASVTQSGKNKYEKDKREREIKVKDNKEW
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcacagattcttgcaccgctgggaccacaaagcttccgcccgtttacccgggagtca
ctcaaggccattgaaaaacgaattaaagaggagaagagtaaaaagcctaaaaaaggagag
caagagggaaatgctgctaatgaggatcagccacaacctaacagtgacctggggcaaggg
aagaaattgccatttatatatggggacattcccaatggaatggtgtccacaccgctggaa
gatctggatccatattattgcaatcagaaaacctttatagtattgaacaaagggaagaca
atctcccgatttaatgccacttctgccttgtacgtgctaagtccattcaacccaatcaga
agaatatcaattaagattttggtacattcattgttcaacataataatcatgtgcactatc
cttgcgaactgtgtgtttatgacttttactgaagattcgagtaggagagccttgttcaag
aatatagagtacacgtttacggcaatatatacatttgattcattaataaagatcttagcc
atgggcttctgtataggcaagtttaccttcctcagagacccattcaactggctggacttc
actgtgattgtgatggcgtatgtgacagagtttgccaagggtttgggtaatgtctctgct
ttgagatctttcagagttgttcgggctctgaaaacaatatcagttatcccaggcctgaag
accattgtaagcgctctgttccagtcagtaaagagactttcagatgtgatgattctgacc
gtcttttgcttgagtgtatttgcactgattggcctgcagctttttatgggcaacctgagg
aataaatgcataaagataccaataaatggcagtataactgagaagggacagctggttttt
actacaaacgtcactgaattcaatcgcacacaatactataatgatgcggataattattat
aaaatggaaggaaggaaagaccctctgctctgtggaaataacagtgatgcagggcaatgc
ccagatggttatttctgtcacaaagcaggccccaatccgaattacaacttcaccagcttt
gataactttggttgggctttcctctctctcttcagactgatgactcaagactactgggaa
aatctataccaacagactcttcgagcttcagggaagatctatatgatcttctttgtgctg
gtgatattcctgggatcattctacctggtgaatctgatcctggctgtggtggccatggcc
tatgatgagcagaaccaggccaccctggaggaggctctgcaaaaagaagaaaagttccag
gctatgatggagcagctcaggaggcaacaagctgaggcccaggcggcagttgcagtattt
gagagtggcaaacttagtggagacagttcctctgaggcctccaaactcagttccaaaagt
gccaaagaacgatgcaaccggagaaagaagaggaaacagagagaggaggaaggggagaaa
ggggacaatgaaaaggtccacaattctgacccagaaaacagcattacaagaaccagcttc
cgatattctgaggatggaaacatactgtcatatgataggacatatcaatctcctcatcag
tcacttgtgagtattcagccctcagtcttctctccacgccgcaacagtaggactagcatc
tttacctttcgtggccgcctgggatcagagaatggatttgcagatgatgagcacagtccg
tttgaggacacaggcagccgccgtggctcgttgtttctgccacactgctctgagcgtctt
tacagtactggcagcagaaacagcttgaccccacgcgttttcctgtccccaaatggaaaa
gtgtgcagctctgtggattgcaatggcacagtgtcatatgtgaactcactgccaagctct
ccggatgttctgcagttgcctgaggtgaccatagaaaaagccactacagatgacaaggag
tacaggaggagatatgaagccgaacaactctcaccaggttttttgaatgagcggacatcc
agacagagggctctgagtgtagctagtattatcaccaacacaatggaagtgctggaggat
tccaggcggaagtgccatccacgctggtataagtttgcgaaagcatttctaatctgggat
tgctttccagcatgggtgaaaataaagagattaattcacacgtttgttatggacccattt
gtggatctgttcatcaccatctgcattgtagtcaatacaatattcatggccatggagcat
cacacctacaaggatcccagcaacaaggatcccaacaaggatgtttccgatttgtccgta
gttcttaaagtgggcaattatgttttcacagggatctttacagctgagatgatcatcaag
attatagccttggatccttataactacttccaagaaagttggaatatatttgatagtgtc
attgtaaccctgagtattatggagcttgggttggaaaatgtacccggaatgtctgttctt
aggtcatttcgtttgcttagagtctttaagctggccaagtcttggcccactttacaaatg
ctgatcaaaatcattcacaactccgtgggtgccctcagcaacctgacactcgtcctggcc
atcattgtcttcatctttgctgtagtaggcatgcagttgttcgggaagagttacaaagcc
aacaagcataaaatttccacagacggtaaacttcgctggcacatgaaagatttcttccac
tcctttctgatagtgttccgtgtgctgtgtggtgagtggatcgaaaccatgtgggactgc
atgatggtggctggacagcccatgtgcctaactgtcttcctcatggtcatggtgattgga
aaccttgtggttttgaacctcttcctggccttgctgctcagctcttttagtgcagataac
ctggcagccacaaatgatgactgtgaaaggaacaacttgcagattgctattgctcgtatc
cgcaagggtgtcgcgtacagtaaagcccgtctgcacagcttctttcacagcaactgtttt
agaaggacagagaataaagtaaaggaggaacatggcctgaaagatggcaagaagcaggct
gaaatgtctactcataccacagtggagctgattaaagacccagggtgtgagaaggaggca
ccaggtgcagacactggctctgagaatttcatcttcaattctagcttgtctatctctgta
cccatagccactgcagactctgaccctgagtgccacaacatggacgatttaagcagttgc
tcttctgacatggaggaagataatgagaagctgtcagatggtatgagctcttcagagggc
agcacagtggacctccagcccctgaaggagagaagagaatcacttgactttgagcttgaa
ttacctgtggatgatccagaggcttgttttacacaagcctgtgtgaacaggtttccttgt
tgcaatgtgaatgtggaaaaaggcaaatggaagacgtggtggaacatcagacacaccagt
tacaggatagtggagcataactggtttgagtcattcatcatctttatgatcctgctgagc
agtgcagcactggcctttgaagacatatacattgagaaaaagaagactgtaaagactgtt
ttggaatatgcagataaagtgtttacctacatcttcatattggagatgcttttgaaatgg
ctggcgtatggatttgctaaatacttcaccaatgcgtggtgctggcttgacttcttgata
gttggcgtctccctgatcagcctagtggccaacgccttcgatatttcaaagctcactccc
attaaatttctccgtacactgcgatccctgagaccccttcgagctctatcacgctttgaa
ggcatgagggtggtggtcaacgctctttttggtgccattccctccatcgtgaatgtgctg
cttgtctgtctcatcttctggctcatctttagcatcatgggtgtcaacttgtttgctgga
aaattttatgaatgtgtgaatgcaacctctggctctcgcctgaatttgagcctggcctcg
aacttgaccgaatgtttgtggtttggcgaaagtgcccggtggaaaaatgtaaagatcaac
tttgataatgttggagcaggatatctggctttgctgcaagtggcaactttcaaaggctgg
atggacattatgtatgctgcagtagaccaccgtggtgtaaatctacagcctcagtttgag
gcaagtctgtactactacatctactttgtaattttcatcatatttgggtccttcttcaca
ttgaaccttttcattggcgtcattattgacaacttcaatcagcagaaaaaaaagtttgga
ggccaagacatttttatgacagaggaacagaagaaatattacaatgctatgaagaaactt
ggctcaaagaagcctcaaaaaccaattccccggccatcgaacaagctccaggctcttctc
tttgacattgtaacaaatcaagctttcgacatcttcattatggtacttatttgccttaac
atgctcactatggtggtggaatcagaagatcagagccaagaagcacgcactcatctgaaa
aggattaacgtggtgtttgtggcattgtttacaatggaatgtgtactaaagatgatcaca
cttcgacagtatttcttcactaatggctggaacatttttgacttcgtagtggttattctc
tcaatagttggcacatttgtctctgaagtcattaagtacctgttttctccaaccttgatt
cgtgttgttcgacttgctcggattggccgaattctgcggctcatcaaaagtgccaaggga
atacgcacccttttgtttgccttaatgatgtctctcccagccctattcaacatcggtctt
cttctcttcttagttatgtttatctacgcaattgttgccatgtcacaatttgcctatgtc
aagaaggaggctggaattgatgacatgtttaacttcgagactttcggcagcagcatgcta
tgtttgtttcagatcactacatctgcagggtgggatggactcctgtcacccattcttaac
agggaacctgactgtgacccacagaaagatcaccctggcagcaacggtaaaggtgactgt
ggcaacccagctattggtatcatcttctttgttagctacattataatatgcttcttgatt
gtggtgaacatgtacatagctgtgattctcgagaacttcagtgtggccacagaagagagt
gcagagccattaagtgaagatgacttcgacatgttctatgaggtgtgggaaaaatttgat
cctgatgctacacagttcatagaatacaaaaagttgtctgactttgctgattccattgac
ccaccgctgcgtatacctaagcctaataaaatccagctaattaatatggacctgcctata
gttagtggggagcgaatccactgcctggacatcttgtttgcatttacaaagcgtgtccta
ggagaaagtggtgacatggatggccttcgcgggcagatggagaaccgtttcatggcctct
aacccttccaaagaatcttatgagcccatcactacaactctacgccacaagcaggaggat
gtgtcagctgtcatcattcagcgggcctacaggatgtatgccaggaaacagaatgtaaaa
atagcccccagcacatacaaagaagttgtacaggagaatggaatggtttcaaacaaggtc
ccagtgacagacaggtttaacaatcactctgcttcagataaatctgacacaacatcctca
accattatcccaccatcatatgccagtgtaacacaatctggtaagaacaaatatgagaaa
gacaagagggaaagggaaataaaagtaaaagataacaaggagtggtaa
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integrated database retrieval system
