Ictalurus furcatus (blue catfish): 128611309
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Entry
128611309 CDS
T09387
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128611309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128611309
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128611309
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
128611309
NCBI-ProteinID:
XP_053486671
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All DBs
Position
8:complement(21856799..21878689)
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AA seq
1260 aa
AA seq
DB search
MLSIFPAVHSRPTSTDLVLEEVNSEDDQDQDQENRSEHPSKPKQAEPVVQLDPEAMSSSA
STSCLKQEDAETQTGQWTPFIESIKREAEDKAMATMEEWMCQERLEMARMAEEVARHAAE
VTVRELAGTRVTVHTPILEVEEEAEPELQELQDEEKEAEILHSTITECQEPVETFIQEVE
EPVEDPEETEEEEEDADVPRVEEPTLPSPETKILTAGQCVSPEPAEEPEEPEEEESDSSS
EAESEPDPITQQPKSCDGASVKQNVTQDEGTLAEEGTCVPFRCDALKACLMRIPCVPVCL
NCFNQLLKKNNITLPQVPPIPKLPSRLSKITPQIPPLPTRLNQLPQRITQIPQQISQHVP
KLPERFPSFPRKLPTFPEQFSCRFPHRLPKPSDLKTMPNPQQQQQSRDLELDHLVRQSPL
HISRTPSPSLPSSILDLPNVPSYPRLPPISPSRQLSGLSNPTFNGEDELTSARPSASSRL
SIHPAVNVEDMDSDSEQHGRTSHHMPQIITPQDPNLKTLTVPRPPKLSRTRFGPAVINLV
RNNCLYNLVVCDRKKLYSSGDEEDEELETQVRAWPSQSSITSADEALKERPSSAASQAST
MVNERLQELAKLFKARTERAKEKLIDPDDLDEDTPPDTAVPPPEPPTEPAPVEESQPTPT
VEEDEQEVYIKLLCFKVKSQSRIGRLIQYRFPSSIDPFTNLGYVLWLFFVTLAWNWNVWM
IPVRWAFLYDVKGSLYPWLIADYLCDTIYILDILLFQPRLQFIRGGDIVTDKKEMRANYM
KDLRFKLDVVSLLPLELFYLLDGVKPLLRCPRILKILSFFEFNNRLEAILTKAYVYRVIR
TTSYLLYSLHVNACLYYWMSNIRGLGATTWVYNGQGNAYIRCFYFAVKTLITIGGLPEPT
ALEEYIFQLINYFIGVFAFSIMIGQMRDVVGAATADQTHYRSCMDSTAKYMGSNRIPKDV
QNRVKTWYNYTWQAQGMLDEEELLVQLPDKMRLDIAVDVSYSIVSKVPLFEGCDRQMIYD
MLKRLRSVVYLPGDYVCKKDEVGREMYIIKSGAVQVVGGPDGKTIFVTLKAGSVFGEISL
LAVGGGNRRTANVIAHGFANLFILDKKGLNEILVHYPESQKLLRKKAKKMLADKKPEKKT
EEKEPVRVIPARKETPKLLKATLEMTEKSGLRGTLAKLKGKKNNKSCVSLQPSICSSVTP
GSPIERQHSEQEADILSQISDSTIQGPPISPSDLEDQRRSVLEGPVLNERTVMGKDKMDE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccatatttccagctgtccactccaggccaacttccacagacctggtgctcgag
gaggtcaactcagaagatgaccaggaccaggaccaggagaacagatctgaacatccatct
aaaccaaaacaagcagagccagtggtgcaattggatccagaagccatgagttcctcagca
tcaacatcatgcctgaagcaggaagatgctgagacacaaaccggacaatggacacccttc
atcgagagcatcaagagagaggcagaggacaaagccatggctactatggaggaatggatg
tgtcaggagcgcttggagatggcgaggatggctgaggaggtggcaagacacgcggcggag
gtcaccgtcagagagctggctggaacccgagtgaccgtacacacacccatcctggaggtg
gaggaagaggctgagccagagttacaggagctgcaggacgaggagaaagaagcagaaatc
ttacacagtacaatcacagagtgtcaggaaccagttgagacgttcatccaggaggttgaa
gagccagtagaagatccagaagagacagaggaagaagaagaggatgcagatgttccccgt
gtagaagaaccaacgcttccttctcctgagacgaagattttaacagcaggtcaatgtgtt
tctcctgaaccagctgaagagccagaggaaccagaggaagaggagtctgatagctcctca
gaggctgaatcagagccagatccgatcactcagcagccgaagtcgtgtgacggagccagc
gtgaagcagaacgtcacccaggatgaaggcacattagctgaggagggaacttgtgttccc
ttcagatgtgatgcgttgaaggcctgcctcatgcgcattccctgtgttccagtgtgcctg
aactgcttcaaccagctgctgaaaaagaacaatatcaccctgccccaagtgccccccata
cccaagctgccctctcgactatccaagataaccccacagatccccccactgcctaccaga
ctcaaccagctacctcaacgaatcacacaaattccccagcagatttcccagcacgtaccc
aaacttcccgagcgcttcccttccttcccccggaaacttcccactttccctgaacaattt
tcctgcaggtttccccacagacttcccaaaccatcagacctcaaaacaatgcctaatcct
cagcagcagcagcagagtcgggacctggagctggaccatctggtccgccagtcccccctt
cacatctcccgtaccccgtccccttccttgcccagctccattctggacttacccaatgtg
ccatcctatccccgcctgccccccatcagcccatcacgccagctctcaggcctctccaac
cccacctttaatggcgaagatgaactcacctccgctagaccttcagctagctctagattg
agcattcacccagccgtaaatgtggaagatatggactcagacagtgagcagcatggaaga
acttcccaccacatgccccagatcatcaccccacaagaccccaacctcaaaaccctcacc
gtgcccagaccacccaaattgagcagaaccaggtttggacctgctgttataaacctagtc
aggaacaattgtttatataatcttgttgtttgcgacagaaagaagctgtactcttcagga
gatgaggaagatgaggagctggagacacaagtcagggcctggccgagccaaagcagcatc
acgagtgctgatgaggcgctgaaggagcgtccctcatcagccgccagccaggccagcacg
atggtgaatgagcgtctgcaagagctggcaaaactatttaaagcaaggacagagcgcgcc
aaggagaaactcatcgatcccgatgacttggacgaggacacaccacctgacactgcagtg
cctcctcctgagcctccgacagaaccagcgcctgttgaggagagtcagcccactcccact
gtggaggaagatgaacaggaagtgtatatcaagctgctgtgcttcaaggtgaagtctcag
tcaaggatcgggcgcctgatccaataccgcttcccatccagcatcgacccgtttaccaat
ctgggttacgtcctgtggctctttttcgtcactttggcctggaactggaacgtgtggatg
atcccggtgcgctgggctttcctctacgatgtcaaaggctccctttacccgtggctgata
gccgactacctgtgcgacaccatctacatcctggacatcctgctcttccagccacgcctg
cagttcatccgcggcggtgatattgtcaccgacaagaaggaaatgagagccaattacatg
aaagatctgcgatttaagctggatgtggtcagccttcttcccctggagctcttctatctc
ctagatggggtcaaacctctcctccgctgcccacggatactgaagatcttgtctttcttt
gagtttaacaaccgtctggaggccattttgaccaaagcctatgtctacagagtcattcgc
accaccagctaccttctgtactcccttcatgttaacgcctgtctctattactggatgtcg
aacatacgaggcctcggagccaccacctgggtatacaacggacagggcaatgcatacatc
cggtgtttctactttgctgtaaagactctgatcactattggtggactgccagaaccgact
gcactcgaagagtatattttccagctcatcaactactttatcggcgtattcgctttctcc
atcatgattggacagatgagagacgtggtgggcgctgcgacagctgatcagacacactac
cgctcatgcatggacagtacagcgaagtacatgggctctaaccgcatccccaaagatgtg
cagaaccgggtgaagacctggtacaactacacatggcaggctcaaggcatgctggatgaa
gaggagttgcttgtgcagttgccagacaagatgaggcttgatatagcagtggatgtgagt
tactccattgtcagcaaagttccactgtttgagggctgtgacaggcagatgatctatgat
atgctgaaacggctcagatcagtcgtgtaccttcccggagactacgtctgtaaaaaggat
gaagtaggtcgagagatgtacatcataaagtcaggagcggttcaggtggttggcggtcca
gacggaaaaactatatttgtgacgctgaaagcaggatctgtgttcggcgaaatcagcttg
ttagcggtgggaggcggaaaccggcgaactgccaacgtcatagcacacggctttgctaat
ctcttcatcttggacaagaagggcctcaacgaaatccttgtgcactatcccgagtcccag
aaactgctacgcaagaaagcaaagaagatgctggcagataagaagccggagaaaaagaca
gaggagaaggagccagtgcgggtgattcctgcgcggaaagaaacccctaaactgttaaag
gccacactggaaatgactgagaaatcgggccttcgaggcacactggccaagctgaaggga
aaaaagaataacaagtcctgtgtttcattacagccatccatctgttcctcggtgacacct
ggctcaccgatcgagaggcaacactcggagcaagaggccgacattctctctcagatctcg
gacagcacaatacaaggacctcccatcagcccctccgacctcgaagaccagaggcgctca
gtgcttgaaggaccagtgctaaacgagaggacggtaatggggaaggacaagatggacgag
taa
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