Ictalurus furcatus (blue catfish): 128613339
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Entry
128613339 CDS
T09387
Name
(RefSeq) CLIP-associating protein 1-A
KO
K16578
CLIP-associating protein 1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128613339
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128613339
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128613339
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
128613339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_GCN1
HEAT
HEAT_EZ
HEAT_MROH2B_C
Cnd1
TPR_CAND1
TOR1L1_N
TPR_DNAAF5
Sec7-like_HUS
MMS19_C
VPS15-like_hel
Ltn1_1st
Dopey_N
ParcG
TAN
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
128613339
NCBI-ProteinID:
XP_053489981
LinkDB
All DBs
Position
10:24349192..24431030
Genome browser
AA seq
1518 aa
AA seq
DB search
MEANMEYIVGQVMQKDLGRRLQVGQEIIDYILDRQKSHDLEHDQTMLDKMVDGLATSWVN
SSNFKVALLGMDIVSALVTRLQNRFKPQIGTVLPSLTDRLGDAKDQVRDQAQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREAVCFCLISTLNIYGAQGLTLSKIVPHICSLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSADKNI
DDDDSVDGGHSSASSKGAASVRRTGSVRRPSSASSTKSTGKEVSAAGALDEEDFIRAFED
VPTIQIYSSRELEDSMNKIKEVLSDEKQDWEHRVTALKKVRSLLLAGATDHEAFLQQLRQ
LEGAFKLSAKDLRSQVVREACITLGHLSSMLGNKFDHGAESIMPTLLNLVPNSAKVMATS
GVAAIRLIIRHTHYPRIIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSCLDRHVAVLM
ETIKKGVHDADAEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKSSDSVMS
LPQSDRSSSSSQESLNRPQSAKASVGSSTTRNKVVSSRVSSTPGSLQRSRSDVDVNAAAT
AKSRMPKVPAAAPFSSAGALPPGSYASLGRVRTRRQSSGSSVGGGASVTDSRGRSRAKVV
SQSQPGSRSSSPGKLIGQSYGKMSSVTSAEKRSRIPRSQGCSRESSPGRSGQVRGSRIPR
PSMSQGCSRDTSRESSRDTSPARGFTPLVSRRHSRSTSALTGSDALQTDRFGLIHQARIS
ASVNAMRILNTGMEVEAAVADALLLGDSRNKRRPVRRWYESPGMYSDDDANSDASSACSE
LSYSSRNGGVPHYMRQTEDVAEILNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRL
CEIFTRMFADPHSKRVFSMFLETLVDFIVLHREDLQDWLFVLLTQLLKKMGADLLGSVQA
KVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNS
SETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLL
HNHLKNSSNAAATSSPSNTVGRTPSRHSGSRTSPLTSPTNCSHGGLSPSMLEYDTENMNS
EEIYSSLRGVTEAIQSFSFRSQEDSYEPIKRDTKKDDASAVASCAADPRLGTDVMEGGRT
ALDNKTSLLNTPSPRSFLGPKTREYNPYNYTDSISTYDKAALKEAVFDDDVEQLRDGRRQ
EFGENKIMAPKSYSAGPAQHLELVGDLLKELSNHSERVEERRAALLELLKVTRDDSVAVW
EEHFKTMLLLLLETLGDKDHTIRALALRVLKEILRSQPARFRNYAELTIMKTLEAHKDCH
KEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTADYPIDLAAIKMQTKVIERIPEESLYQ
LLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEGLKPHLAQLTGSKMKLLNLYIKR
AQTTNSNSSSSSDISSYS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaatatggaatatattgtgggacaggtgatgcagaaagacctgggacgacga
ctccaggtcggacaagagatcatagactacattctggacaggcagaagtcacatgatctg
gagcacgatcagaccatgctcgacaagatggtggacggcctggctacttcatgggtcaac
tctagcaacttcaaggtggctcttctgggaatggacattgtgtctgctttagtgaccaga
ttacaaaatcgctttaaaccccaaattggtacagtcctgcccagtttaacagaccgttta
ggtgatgccaaagaccaagtaagagatcaagcccaggctctgctgttaaaaataatggat
caagctgccaatccacaatacgtatgggaccgaatgttgggaggattcaaacacaagaac
aacaggaccagagaggctgtctgtttctgccttatttccacactaaatatatatggagcc
cagggtttaactctgagcaagattgtgcctcacatatgcagtcttttaggggaccctaca
agtcaggttcgagatggagctatgaactgtcttgtggagatttacagacatgtcggagag
agagtgcgaatggatcttgggaaaaaaggcttgccacaatcacggttgaatgtcattttc
agcaaatttgacgaagtacagcggtcagggaatatggtgctgtctgcagataagaacata
gatgatgacgactctgtggatggaggccattcctccgcctcctctaaaggagcagcgtct
gtccgccgaacaggatccgtgcgcagaccaagctctgcctccagcaccaagagcacagga
aaagaggtgtcagctgctggtgctttggatgaggaagacttcatccgtgcctttgaggat
gtgcccaccatacagatttactccagcagagagcttgaggattccatgaataaaatcaaa
gaggtcctctcagatgaaaaacaggactgggagcacagagtgaccgcgctgaagaaggtg
cgttcgctgctgcttgccggagccactgatcatgaagcgttcctccaacaactgcggcag
ctggaaggagcgtttaagctctccgctaaagacctgcgctctcaagttgtccgtgaggcc
tgcatcacactggggcatctgtcgtccatgctgggtaacaagtttgaccatggagctgag
tctatcatgcccacgttgctcaatctcgtcccaaacagcgctaaagtgatggccacatcc
ggcgtagcagccatccgcctcattatacgacacacacattatcctcggattatccccatc
attaccagtaactgcacgtccaaatccgtggctgtccggcggcgctgttatgagttttta
gaccttttactccaggagtggcagacgagctgtctagacagacatgtagctgttctgatg
gaaaccattaagaaaggagtccacgatgcagacgcagaagccagatctgttgccagaaag
tgttattggggattccatggccacttcagtaaggaggcggagcagctctttcaggctctc
gagctgacctatcagaaggctctgcaatcgcatctgaagagctcggatagtgttatgtct
ctccctcaatccgatcgctcctcctccagctctcaagagagcctcaatcgtccacaatct
gctaaagcatctgtaggaagcagtacaaccaggaataaagtggtgagctctagagtgtcc
tccacacctggctcgctgcagcgatcacgcagcgatgttgacgtcaacgccgctgccacc
gccaagtctcgaatgcccaaagtacccgctgctgctcccttcagctcagctggtgcactg
ccgcctggctcctacgcctcgctaggtcgtgtgcgcacacggagacagagttccggcagc
agcgttggaggcggagcctctgttacagacagcagggggcggagccgagcgaaagtggtg
tcgcagtcacaacctgggagtcgttccagttctcctgggaagcttattggtcagtcctat
ggcaaaatgtcctctgtgacctcagcagagaagcgcagtaggatcccacgcagtcagggc
tgcagccgagagagcagccccggtcgctcgggtcaggtgcggggtagtcgcatcccgcgg
cccagtatgagtcagggttgcagtcgtgacacaagcagggagagcagcagagacacaagt
cctgcacggggttttactccacttgtctctcggcgccactcgcgctccaccagtgccctg
acaggcagcgacgctctgcaaacagatcgttttgggctgatccatcaggcgcggatctct
gcctcggtcaacgccatgcgcatcctgaacacaggcatggaggtggaggcagcagtggct
gatgctctgctattaggagactccaggaataagcggaggcccgtgcggcgctggtacgag
tctcctggcatgtactcggacgatgacgccaacagcgacgcctccagcgcctgttcagag
ctttcctacagctcacgtaacggaggagtgccgcactacatgcgccagacggaggacgta
gccgagatcctaaaccactgcgccagttccaactggtccgagaggaaagaaggcctgctg
ggcctccagaaccttctgaagagccaaagaaccctcagccgtgtggagctcaagaggttg
tgtgagattttcactaggatgttcgccgaccctcacagcaagagagtgttcagcatgttc
ctggaaacgctggtggacttcatcgtgctgcacagggaggatttgcaggactggctcttt
gtgctcctcacacagctgttaaagaagatgggcgctgatctgctgggctcagtgcaggcc
aaagtgcagaaagctctcgatgtcaccagagattcttttccctacgatcagcagttcaac
atcttaatgcgcttcattgtcgatcagacacaaactccaaacctcaaggtgaaggtggcc
attctgaagtatatcgagtctctggccaggcaaatggatcccactgattttgtgaactcc
agtgagacacgcctggccgtctcccgcatcatcacttggacgacggaacccaagagctca
gatgtcagaaaggctgctcaggtggtgctgatctccctgtttgagctgaacacaccagag
ttcaccatgctgctgggagcgctgcctaaaaccttccaggatggagccaccaaactcctg
cacaatcacctgaagaactccagcaatgctgcagccacgagttcgccgagcaacacagtg
ggccgcacaccttcaagacactctggttcccgcaccagtcccctgacctcccctacaaac
tgctctcatggaggactctcacccagcatgctggaatatgacacagagaacatgaactca
gaggagatctacagctctctgagaggagtcactgaagccattcagagcttcagcttccgc
agccaagaggacagctatgagccaatcaaacgcgacaccaagaaagacgacgcgagtgcc
gtagcgtcctgcgctgcagacccccggctaggtacagacgtgatggaggggggccgaacg
gctctggacaacaagacgtcgttactgaacacaccgtcccctcgctctttcctggggccg
aagacacgcgaatacaatccctataactacaccgactccatcagcacttacgataaagct
gctctgaaagaggcggtgttcgacgatgatgtggaacagctccgtgatggtcgtcgtcaa
gagtttggtgaaaacaaaatcatggctcccaaaagttattctgcaggccctgcgcagcac
ctggagctggttggtgacctcctgaaggagctgtccaatcacagcgagcgtgtggaggag
aggcgggccgccctgttggagctgttgaaggtgacccgtgacgacagtgtggccgtatgg
gaggagcattttaaaaccatgctgctgctgctcctggagacactgggggacaaagaccac
accatccgggcgctggcgctgcgtgttctgaaagagatcctgcgaagtcaacctgcacgc
ttcaggaactatgcagaactgaccattatgaaaacactggaggcgcacaaagactgccac
aaagaggtggtgcgtgccgcagaggaggccgcctccaccctggcttcctccatccacccg
gagcagtgcattaaggtcctgtgtcccatcgtacagactgcagactaccccatcgacctg
gccgccatcaaaatgcagaccaaggtcatcgagcgcattccggaggagtccctttatcag
ctgctgcctgacatcatccccggtctactccagggttatgataacactgagagcagcgtg
cggaaagccagtgtcttctgccttgtggcaatttattctgtgattggagaagggttgaag
cctcatcttgcccaactgacgggcagcaagatgaaactgctgaacctctacatcaagcga
gcccaaactaccaacagcaacagcagcagctcctctgacatctcctcctacagctaa
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