Ictalurus furcatus (blue catfish): 128616272
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Entry
128616272 CDS
T09387
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128616272 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128616272 (tent4a)
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128616272 (tent4a)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128616272 (tent4a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
128616272 (tent4a)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
128616272 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
128616272
NCBI-ProteinID:
XP_053494826
LinkDB
All DBs
Position
12:22652962..22674409
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AA seq
745 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMHVWETSQGIRANSSHHHRQQPPPQQQHSEPGCSSSSSSS
SSSSSSTHHHPHPPLPPSSHHSNANSTNIRSSFATLSINNNNNVSSASPPLNAREMAPTE
TGSRSAPDPDPDCSYSVSSSALRANETNKNRLCFSFNELNNVNQNHLHNHYHHHHHHHHH
HHQHSRYFHPEQQPYFQQNCMKRYPVTPGFNNHNNHHHHHHPGRRKHENKASTYGINYLL
SNWTNGNHVSPVTLWKTRTYSPGLNGLHEEIIDFYNFMSPRPEEATMRQEVVDRIESVIK
ELWPSADVQIFGSFSTGLYLPTSDIDLVVFGKWDRPPLQQLEQALRKNNVAEPCSIKVLD
KATVPIIKLTDQETEVKVDISFNVETGVKAARFIKDYVKKYTVLPYLIFVLKQFLLQRDL
NEVFTGGISSYSLILMVISFLQLHPRIDARNPNMNLGVLLIEFFELYGRHFNYLKTGIRI
KNGGAYMAKEDIMKAMSNGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKHVFDYAYIVLSH
AVSPLANSYPNKDSDSTLGRIIKVTQEVIDYREWIVNKWGSKQSERNNGPAHKDSAEQAD
SSALRSVGVEEQQQLQRDSASPHSADSPMSLSSPQQHSSASSLSGSDIDSDCTPCAAPAV
PSYPLQTLAPGTLSKANLTMPLTMPAANQTRVSMPGSLPLHVLPGRQQAGPKGFHNPALP
HSLTQYNRNMWRHRKRDGLPTSVSR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtcgcctggattcagccggaacagaagggacctgctaatgcgttatgg
atgcatgtgtgggagacgtctcagggaatccgggctaactcttctcaccatcaccgccaa
caaccaccaccacagcagcaacacagcgagcctgggtgttcatcatcatcctcatcatca
tcctcatcatcatccagcacccaccaccatcctcatcctcctcttcctccttcttctcac
cacagcaatgccaacagcactaatatccggagctccttcgcgacattatcgattaataat
aataacaacgttagctccgcgtcacctcctctgaacgccagagagatggctcccactgag
acgggctctcggtctgctccggacccggacccggactgctcctactcggtttcctcttcc
gccttaagggctaacgagaccaacaaaaaccgcttgtgtttcagtttcaacgaactgaac
aacgtcaaccaaaatcaccttcataatcattatcaccaccatcatcatcatcatcatcac
caccaccaacattcgcgatatttccatccggaacagcagccgtatttccagcagaactgc
atgaagcgctacccggtcaccccgggatttaacaaccacaataaccaccatcaccaccat
cacccgggacggaggaaacatgaaaataaagcgagcacatacgggataaattatctcctc
tccaactggactaacggcaatcatgtcagtcctgttacactgtggaaaaccaggacgtac
agcccaggacttaacgggcttcatgaggagatcatagacttctacaacttcatgtcgcct
cgacccgaagaggccaccatgaggcaagaggtagtcgaccgtatcgagtccgtcatcaag
gagctgtggccaagtgctgacgttcagatattcggcagctttagcactggactctacctc
ccaaccagtgacattgacttggtggtgtttgggaaatgggacagaccccccctgcagcag
ttggagcaggccctccggaaaaataacgtggccgagccatgctctatcaaagtacttgac
aaagctacggtaccaattattaaactgaccgatcaggaaacggaggtcaaagtggacatc
agtttcaacgtggagactggagtcaaagccgcccgcttcatcaaggattacgtgaagaaa
tataccgtgctgccttacttgatcttcgtgctgaagcagttcctcctgcagagggatctg
aacgaggtctttactggaggcatcagctcctacagcctcatcctgatggtcatcagcttc
ctgcagctccacccccgaatcgacgccaggaaccccaacatgaacctcggcgttctgctg
atcgagttcttcgagctgtacggtcgccattttaactacctgaaaacgggcatcaggatc
aagaacggcggtgcctacatggccaaagaggacatcatgaaagccatgagcaacggctac
aggccgtccatgctgtgcatcgaggaccctcttcttccgggtaacgacgtgggcaggagc
tcgtacggagccatgcaggtgaaacacgtgtttgactacgcctacatcgtcctcagccat
gcggtgtcgcctctcgcaaactcctaccccaacaaggacagcgacagcactttgggacgc
atcatcaaagtcacccaggaagtgatcgactacagggagtggatcgttaacaagtgggga
agcaagcaaagcgagaggaataacggtcctgctcataaagactcggcggagcaggcggac
tcgagcgctctgcgcagcgtcggagtggaggagcagcagcaactccagagagactctgcg
tctcctcacagcgccgactctcccatgtctctgtccagccctcagcagcactcgtctgct
tcgtctctgtcaggcagcgacatcgactcggactgcacgccgtgcgcggccccggcagtg
ccctcgtaccctctgcagacgctggcaccgggcacgctgagcaaggccaacctcaccatg
ccactcacaatgcctgctgccaaccagacgagagtatcgatgcctgggagtcttcctctc
cacgttttacctggcagacagcaggctggtcccaagggcttccacaacccggctttacca
cacagcctcacccagtacaaccgcaacatgtggcgacataggaagagggacggtctacca
accagcgtcagcagataa
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integrated database retrieval system
