Ictalurus furcatus (blue catfish): 128624736
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Entry
128624736 CDS
T09387
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128624736 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128624736 (slc6a11b)
Transporters [BR:
ifu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128624736 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128624736
NCBI-ProteinID:
XP_053508390
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Position
21:3325072..3369506
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AA seq
654 aa
AA seq
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MCVSARACVCVSVSSRDISESGPVFSSHAPGRTQRFTLLSLAGCWEVMTADKPVPMVNGR
HAEDAEAPHASPVHERGQWGSKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFVPYVI
FFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAYLNVYYVIILAWA
IFYLFNCFTTELPWASCGHYWNTENCVDFNNASVENLTNPYATSPVIEFWERRVLSISGG
IEQVGKLRWELALCLAVAWVICYFCIWKGPKSTGKVVYVTATFPYFMLVILLIRGITLPG
AADGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNSYNNNCYRDCIML
CCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFIAYPKAVTMMPWSPLWAC
LFFMMLIFLGLDSQFVCVESLVTAVVDMYPKTFRVGFRRELLILGMSVASFILGLTMLTE
GGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDKFYLNIEDMIGYKPIFFIKWCWM
ILTPGICSGIFLFFLIKYKPLKYNNVYTYPDWGYGIGWTMAMSSMICIPLGIIVQIWKTE
GTFMERIKKLTTPSPDLRMRGHLSAKSPYAINDADAKMRVDGKLSTITEKETHF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtctgcacgcgcgtgcgtgtgtgtcagtgtttcgtcgcgagacatttcggag
tcgggtccggtgttctcctcgcatgctccgggtcggacccagcgttttaccctcttatcg
ctcgcaggctgttgggaggtgatgacagccgacaagcccgtgcccatggtgaacgggagg
cacgcggaagacgccgaggctccgcacgcgagccccgtgcacgagcgcggccagtggggc
agcaagttggagttcgtgctctcggtggccggagagatcatcggactcggcaacgtgtgg
aggttcccatatctctgctacaagaacggaggaggtgctttctttgtgccttatgtcatc
ttctttgtgtgctgcggtatccctgtgttcttcctggagacagcgctaggccagtttacc
agtgaaggaggaatcacatgctggagaaaagtgtgtccacttttcgagggtattggttat
gcaactcaggtcatcgaggcctatctgaacgtgtattatgtgattattttggcatgggca
atcttctacctgtttaactgcttcaccaccgagctgccctgggcctcctgcggccattac
tggaatacagaaaactgtgtggatttcaacaatgccagtgtggaaaacctcaccaaccct
tatgccacctcaccagtaatagagttttgggagcgtcgtgtcctcagtatatccggtgga
attgaacaggttgggaagctgcgctgggaacttgctctgtgccttgcagtggcttgggtc
atatgttatttctgcatatggaaaggtcctaaatcaactggaaaggttgtatacgtcact
gcaaccttcccttatttcatgttggtgatcctgctcattcgagggatcacacttcctggt
gcagcagatggaatcaagttctacctttaccctgacatctctcggctctcagacccccag
gtgtgggtggatgctggaactcagatcttcttctcatatgccatctgtctgggatgtctg
actgctctcgggagctataacagttataataacaactgttacagggactgtatcatgcta
tgctgcttgaatagtggcacgagttttgtggcaggattcgccatcttctctgtattaggt
ttcatggcttatgaacagaacgtgccgattgaagctgtggctgaatcaggaccaggtctg
gcttttattgcatatccaaaagccgtgaccatgatgccatggtctcctctgtgggcatgc
ctcttcttcatgatgctcatcttcctcggcctggacagtcaatttgtgtgtgtagagagt
cttgtgactgccgtggtggacatgtaccccaaaaccttcagagtgggattccgtcgagag
ctcctgatcctagggatgtctgtggcttcttttattttgggtctaaccatgttgacagag
ggtggaatgtatgtgttccagttgtttgattcctatgctgccagtgggatgtgtttgctt
tttgtggccatctttgagtccatctgcatcggctgggtctatggcagtgacaagttttat
ttgaacattgaggacatgattgggtataagcccatatttttcatcaagtggtgctggatg
atcctcacccctggcatctgttcaggaattttcctctttttcttgatcaagtacaagccc
ctgaaatacaacaatgtgtatacgtatccagactggggttatggcattggatggacgatg
gcaatgtcctcgatgatctgcatccctctgggcattatagttcagatctggaaaacagaa
ggaaccttcatggagagaatcaagaagctgaccaccccgagccccgatctgaggatgaga
ggccacctcagtgcaaagagtccctacgccatcaatgatgctgatgctaaaatgagggtg
gacggcaaactctccaccattacggagaaggagacacatttctaa
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