Idiomarina loihiensis L2TR: IL2555
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Entry
IL2555 CDS
T00218
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo00300
Lysine biosynthesis
ilo00470
D-Amino acid metabolism
ilo01100
Metabolic pathways
ilo01110
Biosynthesis of secondary metabolites
ilo01120
Microbial metabolism in diverse environments
ilo01230
Biosynthesis of amino acids
Module
ilo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IL2555 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IL2555 (dapF)
Enzymes [BR:
ilo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IL2555 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AAV83387
UniProt:
Q5QUS6
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All DBs
Position
complement(2739467..2740294)
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AA seq
275 aa
AA seq
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MLLHFSKMHGLGNDFMVVDNVTQNLYVNPDQIRRWADRHTGIGFDQMLLVEPPYDPDLDF
HYRIFNADGSEVAQCGNGARCFAKFVKAKNLSNKNHLKVSTKAGKMVLHLEKDGQVTVDM
GEPLFEPAAVPFKAQKAEQTYVLRVKEETVLCGVLGLGNPHCVIAVDNVDTTPVETLGAA
LAAHERFPESVNVGFMQKVSADEIKLRVFERGVGETRACGSGACAAAVAGIQQGLLNERV
KVSLPGGDLIIRWQQGQPVKMTGPAELVYDGQMVL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgttattacatttttcaaaaatgcacgggctcggcaacgactttatggtggtggataac
gtcactcagaatttatatgtgaacccagaccaaatacgtcgctgggcagaccggcacacg
ggcattggttttgatcagatgctgttagttgagccgccctatgaccctgatttggatttt
cactaccgcatttttaatgccgatggcagcgaagttgctcaatgtggtaatggtgcccgc
tgctttgcgaagtttgtaaaagctaaaaacttaagcaataagaatcaccttaaagtcagt
accaaggccggaaaaatggttctgcacttagagaaagacggtcaggtgacggtggatatg
ggcgaacccttattcgaaccggcggcggtgccttttaaagcgcaaaaagcagaacagacc
tatgttttgagagtaaaagaagaaacggttctttgtggtgttcttggtctgggcaatccg
cattgtgttatcgctgtggataacgtcgacacgacacccgtggaaactctgggagcggct
ttggcagcgcatgagcggttccccgaaagcgtgaatgtaggttttatgcagaaagtatcg
gctgatgaaattaaactgcgcgtgtttgagcgtggtgttggtgaaactcgggcgtgcggc
agtggcgcctgcgccgcagctgtagccggcattcagcaaggcttattaaatgagcgagta
aaagtcagcttgcccggcggggacttaattatccgttggcagcaggggcagcctgtaaaa
atgaccggccccgcagaattagtttacgatggacaaatggtgttatga
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