KEGG   Ipomoea nil (Japanese morning glory): 109183439
Entry
109183439         CDS       T04663                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109183439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109183439
Spliceosome [BR:ini03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109183439
 Complex B
    109183439
 Complex C
   U2 SnRNP specific factors
    109183439
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 109183439
NCBI-ProteinID: XP_019189074
LinkDB
Position
Un
AA seq 509 aa
MSSTLLEVTRASHEEIERLERLIVKDLQAEPATNKDRLHQSHRVRNVIEQILETTHKIVD
IYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDTSDEYEQLL
KEEPQMEFSGEEGFGRYLDLHELFGEYINSKFGEPIEYTAYLDVFYKPHKISRKLKSTRQ
YREYLQKLLEYLIYFFERTEPLQDTDRIFSKVVAEFEEQWTNGSFEGWDDDSQENGSASM
DHTVIDLDYYSTVEELMEVGPDKLKEALAALGLKSGGTVQQRAERLFLTKHTPLEKLDKK
HFAKGSRGPERNGGGAPPQLNEDAKEVALMEAKIRKLCDLLEETIIRTKENVEKKQALTY
EEMEAEREEEEVQAESESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKQLWERIQERQGLNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctactggaggtgacgcgtgcgtcgcacgaggagatagaacgactcgag
cggctcatcgtgaaggatctccaggccgagccggctaccaacaaggaccgcctccaccag
agccaccgcgttcgaaatgtcattgagcaaatactcgaaaccacgcacaaaatcgttgat
atctacgaagataaagacggtgcacggaaggatgagattgcagctcttggaggccagact
gcaactggaactaacgtgttcagtgctttttatgacagattaaaggagatccgggaatac
catagacggcatcctgctgcacgtgttgtcgataccagtgatgagtatgagcagcttctc
aaggaggagccacagatggagtttagtggggaagaggggtttgggcgatacctagatttg
catgaactgtttggtgaatatattaactccaaatttggtgagccaattgaatatactgct
tatcttgacgtcttctacaaaccacacaagatttcgcgcaaactgaagtcaacaaggcag
tacagggaatatttgcagaagttacttgagtatttgatatattttttcgagcggacagag
cctttgcaggacactgataggatattttcaaaggtggttgctgagtttgaagagcaatgg
acaaatgggagctttgaaggatgggatgatgattctcaggaaaatgggagtgcttcaatg
gatcatactgtgattgatcttgactactatagtacagttgaggaattgatggaagtgggc
cctgataagctgaaggaggcattagctgcactaggattgaagtcaggaggtactgtccag
cagcgtgctgaaagacttttccttacaaagcatacacctcttgaaaaattggacaagaaa
cattttgctaaaggttctcggggtcctgagcggaatggtggtggtgctcctccacaactg
aatgaagatgcaaaagaagttgcacttatggaagcgaaaataagaaagctctgtgatcta
ttggaggagacaattatccgcacaaaggaaaatgttgagaagaaacaggctctgacatac
gaggaaatggaggcagaacgggaagaggaagaagtacaagcagagtcagagagtgatgat
gaagagcagcagatttataaccccttgaagttgcccatgggctgggatgggaaacctatt
ccgtattggttatataaacttcatgggcttggtcaggaattcaagtgtgagatctgtggg
aaccacagttactggggtcgtagagcatatgaacgacatttcaaggaatggaggcatcaa
catgggatgcgatgtcttggtatcccgaataccaagaacttcaatgagattacatctatt
gaggaagcaaagcaactttgggagagaatccaggagagacaaggtcttaacaaatggcgc
ccagatcttgaggaagagtatgaagatcaagaaggcaatatctataacaaaaagacatac
acagatctgcaacggcagggtttgatttag

DBGET integrated database retrieval system