Ipomoea nil (Japanese morning glory): 109188878
Help
Entry
109188878 CDS
T04663
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
109188878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109188878
Transcription factors [BR:
ini03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109188878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
109188878
NCBI-ProteinID:
XP_019195068
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MDNGEILSDFFEDSELAGDDIFSILDALDGASKTTDLLSPKSVSSGAVQESCETAAVAAA
SPRTCKKRKTTSAAASDGSEDGQQQQPRTSCHITVERNRRKQMNDHLSVLRSLMPAFYVK
RGDQASIIEGVVDYINELQQILQSLETKKQRKAYSSEVLSPRILSPSPRKPPLSPRLSLP
PISPRTPQPTSPYKPTNPSTSTRLQPPPSLAAAGYLLPAAATTISEPAAASSSSTSAIDS
ANELAANSTSAIADVEVKFSGSNVILKTVSPRIPGQAVKIISALEDLALEILHVSISTIN
DDTSLNSYTIKIGIECQLSAEELAQQIQQTFC
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggataacggtgagatattatcggatttctttgaggattcggagcttgccggcgacgac
atctttagtattctcgacgctttggatggcgcttccaaaactaccgatttgctctctccc
aagtcggtttcttctggcgcagttcaagaatcatgtgaaacggcggcggtggcggcggct
tccccaaggacttgcaagaaacggaaaacaaccagcgccgccgccagtgatgggtcggag
gacgggcagcaacaacaacctcgtacgtcgtgtcacataaccgtcgagcggaatcgccgg
aagcagatgaacgaccatttgtctgtcctccgctctctcatgcccgccttttatgtcaaa
aggggtgaccaagcatcaatcatagaaggagttgtggattacataaacgagttgcagcag
attcttcaatctttggagacgaagaagcaaagaaaagcttacagtagcgaagttctaagt
cccagaatactgtcacccagtccaagaaaaccacctttgagtccgaggttaagcttgccg
ccgataagcccaagaacgccgcaaccaacctctccgtacaaacccacaaatccaagtacc
agtacgaggctgcaaccgccgccgtcacttgccgccgccggttacctcttacctgctgct
gcaaccaccatttctgagcctgcggcggcttcttcgtcttccacttccgccattgacagc
gccaacgagctggcggcgaactccacgtcggcgattgccgacgtggaggtgaagttctcc
gggtcgaatgtgatcctaaagacggtttctccgcgcattcccggccaagccgtgaagatc
atttctgcacttgaagacctcgccctcgagattctccatgtcagcatcagcaccattaat
gacgatacctcccttaattcctacactattaagattggaattgaatgccaactgagtgcg
gaagaattggctcaacaaatccagcaaacattctgctaa
DBGET
integrated database retrieval system
