Ipomoea nil (Japanese morning glory): 109193005
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Entry
109193005 CDS
T04663
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ini03016
]
109193005
Enzymes [BR:
ini01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109193005
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109193005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Imm11
Motif
Other DBs
NCBI-GeneID:
109193005
NCBI-ProteinID:
XP_019199304
LinkDB
All DBs
Position
Un
AA seq
239 aa
AA seq
DB search
MAPPRWKGKGAAKALADPMSSIVSQLQSSLVKSNSLGLLSGSSVLLEADAEQTDLLNRSC
FGKPVISAQKNSQWFQFSLEEAFYLCYSLKCINVVDENKSELSVEELWKYMISTRENFPS
LCKAYSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHAEYAVLVLSSEGGDGNDRLRVWSD
YHCTLRLCGSVAKTLLVLHVEKHNLDAESPSCLDNYIIEERTITRWSPEQCREDKVVST
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccgagatggaaaggaaagggagcagctaaagcacttgcagaccccatgtcc
agcatagtatcacagcttcagtcttctttagtcaaatccaattctttaggattactctca
ggttcaagtgtacttcttgaagctgatgcagaacaaactgaccttctcaaccggtcgtgt
tttggtaagcctgttatatcagctcagaagaatagtcagtggtttcaattcagtttggag
gaagcattttacttgtgctattcattaaaatgcatcaatgttgtggatgagaataagagt
gaattgagtgttgaagagttgtggaagtacatgatatccacgagggaaaactttcctagt
ttatgcaaagcatattctcatctccgatcaaagaattgggtggttaggtcagggtctcag
tatggcgtggactttgtagcttatcgccatcatcctgctctggtgcacgcagaatatgct
gtgcttgttttatcctcagaaggaggcgatggaaatgatcgtttgagggtctggtctgac
tatcattgcactcttcggctctgtggcagtgtagccaagacattgctggttcttcatgtg
gagaaacataatctcgatgcagaatcaccatcatgcttagataattacatcatcgaagag
agaaccattactagatggagtccagaacagtgccgcgaggataaagtggttagtacttaa
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